RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 ZNF808Q8N4W9 903 aaPredicted RBP9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 ZNF709Q8N972 641 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 CNEP1R1Q8N9A8 125 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 NECAP1Q8NC96 275 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 PFDN5Q99471 154 aa9.7□□□□□ -0.86
SEMA4D-201ENST00000339861 ZNF98A6NK75 572 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 DNASE2O00115 360 aaPredicted RBP9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 ADAM20O43506 726 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 EFNA2O43921 213 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 TPPPO94811 219 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 AADACP22760 399 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 DSCR4P56555 118 aaPredicted RBP9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 NKX6-1P78426 367 aaPredicted RBP9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 SPANXN5Q5MJ07 72 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 NCMAPQ5T1S8 102 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 TFAP2EQ6VUC0 442 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 CCDC54Q8NEL0 328 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 OR10D3Q8NH80 312 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 PLEKHA2Q9HB19 425 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 SLC2A9Q9NRM0 540 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 A0A1B0GTI1 187 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 A0A1W2PQM1 296 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 NPIPB7O75200 414 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 CBR3O75828 277 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 CLDN1O95832 211 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 CD8AP01732 235 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 FOSL2P15408 326 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 S100PP25815 95 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 ZNF266Q14584 549 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 EXT1Q16394 746 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 CSRP2Q16527 193 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 HIST2H3PS2Q5TEC6 136 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 SPINK14Q6IE38 97 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 OR5C1Q8NGR4 320 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 NAA60Q9H7X0 242 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 IDH3GP51553 393 aaPredicted RBP9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 UBE2NP61088 152 aaKnown RBP9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 ARG2P78540 354 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 TSC22D1Q15714 1073 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 DCAF12Q5T6F0 453 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 GHRLQ9UBU3 117 aa9.69□□□□□ -0.86
SEMA4D-201ENST00000339861 A0A0A6YYD4 124 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 TRAV20A0A0B4J274 112 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 TMEM267Q0VDI3 215 aaPredicted RBP9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 ZP4Q12836 540 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 IGSF11Q5DX21 431 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 ZNF488Q96MN9 340 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 NIPSNAP3BQ9BS92 247 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 DEFB127Q9H1M4 99 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 UFSP2Q9NUQ7 469 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 C7orf77A4D0Y5 90 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 CEBPZOSA8MTT3 80 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 PRSS44E7EML9 344 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 ZNF587BE7ETH6 402 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 SOX15O60248 233 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 FUT3P21217 361 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 EPHA8P29322 1005 aaPredicted RBP9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 GABRA4P48169 554 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 DVL1P1P54792 670 aaPredicted RBP9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 LHFPL2Q6ZUX7 228 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 CXorf67Q86X51 503 aaPredicted RBP9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 WDFY1Q8IWB7 410 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 ADPRHL1Q8NDY3 354 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 ERGIC1Q969X5 290 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 PTX4Q96A99 478 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 RBMXL1Q96E39 390 aaKnown RBP9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 UNKLQ9H9P5 680 aaKnown RBP9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 OBP2BQ9NPH6 170 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 NKX2-6A6NCS4 301 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 ARF1P84077 181 aaKnown RBP9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 RUNX1Q01196 453 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 DHODHQ02127 395 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 STRADBQ9C0K7 418 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 CDH20Q9HBT6 801 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 BOKQ9UMX3 212 aaPredicted RBP9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 LHX6Q9UPM6 363 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 ZNF106Q9H2Y7 1883 aaKnown RBP9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 KIF26AQ9ULI4 1882 aaPredicted RBP9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 IGKV1D-8A0A087WSZ0 117 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 IGKV1-9A0A0C4DH69 117 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 IFI6P09912 130 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 IZUMO4Q1ZYL8 232 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 SLC25A47Q6Q0C1 308 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 POC1BQ8TC44 478 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 RNF126Q9BV68 326 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 CHST5Q9GZS9 411 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 SH3BGRL3Q9H299 93 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 B3GAT1Q9P2W7 334 aa9.68□□□□□ -0.86
SEMA4D-201ENST00000339861 PCDH15Q96QU1 1955 aa9.67□□□□□ -0.86
SEMA4D-201ENST00000339861 BMP5P22003 454 aa9.67□□□□□ -0.86
SEMA4D-201ENST00000339861 PTAFRP25105 342 aa9.67□□□□□ -0.86
SEMA4D-201ENST00000339861 WDR74Q6RFH5 385 aaPredicted RBP9.67□□□□□ -0.86
SEMA4D-201ENST00000339861 OR10J5Q8NHC4 309 aa9.67□□□□□ -0.86
SEMA4D-201ENST00000339861 DOCK10Q96BY6 2186 aa9.67□□□□□ -0.86
SEMA4D-201ENST00000339861 ZNF816-ZNF321PA0A0X1KG74 233 aa9.67□□□□□ -0.86
SEMA4D-201ENST00000339861 NXPH2O95156 264 aa9.67□□□□□ -0.86
SEMA4D-201ENST00000339861 IL2RGP31785 369 aa9.67□□□□□ -0.86
SEMA4D-201ENST00000339861 FGF8P55075 233 aaPredicted RBP9.67□□□□□ -0.86
SEMA4D-201ENST00000339861 ADIRFQ15847 76 aa9.67□□□□□ -0.86
SEMA4D-201ENST00000339861 VAX1Q5SQQ9 334 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms