RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 PDCD1Q15116 288 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 IL22RA2Q969J5 263 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 SENP5Q96HI0 755 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 HSD17B10Q99714 261 aaKnown RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 P4HTMQ9NXG6 502 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 GNG12Q9UBI6 72 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 LOC100509620A0A075B734 347 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 IGHV1OR15-9A0A0B4J2B8 117 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 A0A1W2PS18 150 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 C16orf97H3BN30 126 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 GYPAP02724 150 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 AQP1P29972 269 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 HOXA6P31267 233 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 ARHGAP11BQ3KRB8 267 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 CCSMST1Q4G0I0 132 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 Q6ZVL8 140 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 HAPLN4Q86UW8 402 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 KLHDC8AQ8IYD2 350 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 OR2M3Q8NG83 312 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 OR5K2Q8NHB8 316 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 IL17DQ8TAD2 202 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 BLNKQ8WV28 456 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 ULBP2Q9BZM5 246 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 OR51B6Q9H340 312 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 C6orf106Q9H6K1 298 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 SLC17A4Q9Y2C5 497 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 YJEFN3A6XGL0 299 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 SH2D1BO14796 132 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 FAM157CP0CG43 387 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF26P17031 533 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 CD33P20138 364 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 USF1P22415 310 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 FUT6P51993 359 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 SOX4Q06945 474 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 DGAT2L7PQ6IED9 249 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 FAM166AQ6J272 317 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 GUSBP11Q6P575 273 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 DPPA4Q7L190 304 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 LMO3Q8TAP4 145 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 APOBEC3DQ96AK3 386 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 SPNS1Q9H2V7 528 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 TXNIPQ9H3M7 391 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 GSTO2Q9H4Y5 243 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 IKZF5Q9H5V7 419 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 ANKRD10Q9NXR5 420 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 TRAPPC2LQ9UL33 140 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 TMED7Q9Y3B3 224 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 DBX1A6NMT0 343 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 A8MWL6 223 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 BCL2L11O43521 198 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 FOLR1P15328 257 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 SPINK2P20155 84 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 ZBTB25P24278 435 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 SLC25A1P53007 311 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 CMC4P56277 68 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 RHOGP84095 191 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 DPTQ07507 201 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 RPEL1Q2QD12 228 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 DHRS7BQ6IAN0 325 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 OR5M10Q6IEU7 315 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 LYPD4Q6UWN0 246 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 LRTM2Q8N967 370 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF680Q8NEM1 530 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 OR2AK2Q8NG84 335 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 ADAT1Q9BUB4 502 aaKnown RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 MYOZ1Q9NP98 299 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 MPC1Q9Y5U8 109 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 ARL2-SNX15V9GYD0 113 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 RFPL4AA6NLU0 287 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 RFPL4AL1F8VTS6 287 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 GPR37O15354 613 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 LILRA1O75019 489 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 CYB5R3P00387 301 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 GZMHP20718 246 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 CD1CP29017 333 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 EVX1P49640 407 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 CLDN20P56880 219 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 CYHR1Q6ZMK1 362 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 SPACA3Q8IXA5 215 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 OR4F17Q8NGA8 305 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 OR4F5Q8NH21 305 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM19Q96HH6 336 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 OR4F4Q96R69 305 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 FGF20Q9NP95 211 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 CMC2Q9NRP2 79 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 BUD23O43709 281 aaKnown RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 EDN3P14138 238 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 SSTR4P31391 388 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 TSPAN7P41732 249 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 MRPS34P82930 218 aaKnown RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 DSC2Q02487 901 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM81Q6P7N7 255 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 SPNS2Q8IVW8 549 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 PARP16Q8N5Y8 322 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 OR10AG1Q8NH19 301 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 GPR119Q8TDV5 335 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 CSF3RQ99062 836 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 SERGEFQ9UGK8 458 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 TUBD1Q9UJT1 453 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 ABCA2Q9BZC7 2435 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms