RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 OR5T2Q8NGG2 359 aa13.04□□□□□ -0.32
TNFSF13-201ENST00000338784 RTN4IP1Q8WWV3 396 aaPredicted RBP13.04□□□□□ -0.32
TNFSF13-201ENST00000338784 TMEM45BQ96B21 275 aa13.04□□□□□ -0.32
TNFSF13-201ENST00000338784 GALNT14Q96FL9 552 aa13.04□□□□□ -0.32
TNFSF13-201ENST00000338784 RTTNQ86VV8 2226 aa13.04□□□□□ -0.32
TNFSF13-201ENST00000338784 FAM221AA4D161 298 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 LRP3O75074 770 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 ZNF205O95201 554 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 F10P00742 488 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 EDN3P14138 238 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 FCGR2CP31995 323 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 FXYD4P59646 89 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 FOXO1Q12778 655 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 MALLQ13021 153 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 TMEM187Q14656 261 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 PABPC1L2AQ5JQF8 200 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 SPSB4Q96A44 273 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 MARS2Q96GW9 593 aaKnown RBP13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 ZPBPQ9BS86 351 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 C1QTNF5Q9BXJ0 243 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 HRH4Q9H3N8 390 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 ZNF286AQ9HBT8 521 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 TREM1Q9NP99 234 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 PURGQ9UJV8 347 aaKnown RBP13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 BOKQ9UMX3 212 aaPredicted RBP13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 LSM5Q9Y4Y9 91 aaKnown RBP13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 FRYLO94915 3013 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 LINC01387J3KSC0 135 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 PDCD6O75340 191 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 MRPL33O75394 65 aaKnown RBP13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 JTBO76095 146 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 IGHV3-9P01782 118 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 OR5AC1P0C628 307 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 RCC1P18754 421 aaPredicted RBP13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 GUCA2BQ16661 112 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 SP6Q3SY56 376 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 TSPO2Q5TGU0 170 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 SPINK14Q6IE38 97 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 CFAP161Q6P656 301 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 CPEB3Q8NE35 698 aaKnown RBP13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 PSMF1Q92530 271 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 AIFM2Q9BRQ8 373 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 SUCNR1Q9BXA5 334 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 PRDM14Q9GZV8 571 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 SMOC1Q9H4F8 434 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 LRFN1Q9P244 771 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 PRELID1Q9Y255 219 aa13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 CARHSP1Q9Y2V2 147 aaKnown RBP13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 NOSIPQ9Y314 301 aaKnown RBP13.03□□□□□ -0.32
TNFSF13-201ENST00000338784 ZNF587BE7ETH6 402 aa13.02□□□□□ -0.32
TNFSF13-201ENST00000338784 SCGB1D2O95969 90 aa13.02□□□□□ -0.32
TNFSF13-201ENST00000338784 GAPDHP04406 335 aaKnown RBP13.02□□□□□ -0.32
TNFSF13-201ENST00000338784 RBM11P57052 281 aaKnown RBP13.02□□□□□ -0.32
TNFSF13-201ENST00000338784 TMEM33P57088 247 aa13.02□□□□□ -0.32
TNFSF13-201ENST00000338784 TMEM105Q8N8V8 129 aa13.02□□□□□ -0.32
TNFSF13-201ENST00000338784 SYT3Q9BQG1 590 aa13.02□□□□□ -0.32
TNFSF13-201ENST00000338784 PLEKHA2Q9HB19 425 aa13.02□□□□□ -0.32
TNFSF13-201ENST00000338784 RHOFQ9HBH0 211 aa13.02□□□□□ -0.32
TNFSF13-201ENST00000338784 SLC2A9Q9NRM0 540 aa13.02□□□□□ -0.32
TNFSF13-201ENST00000338784 UQCC1Q9NVA1 299 aa13.02□□□□□ -0.32
TNFSF13-201ENST00000338784 PARPBPQ9NWS1 579 aa13.02□□□□□ -0.32
TNFSF13-201ENST00000338784 LUZP4Q9P127 313 aa13.02□□□□□ -0.32
TNFSF13-201ENST00000338784 FBXL17Q9UF56 701 aa13.02□□□□□ -0.32
TNFSF13-201ENST00000338784 PROB1E7EW31 1015 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 MED6O75586 246 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 FUT3P21217 361 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 SULT1A2P50226 295 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 CAV2P51636 162 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 TMEM268Q5VZI3 342 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 TMEM211Q6ICI0 200 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 CALHM1Q8IU99 346 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 ZNF611Q8N823 705 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 LRTM2Q8N967 370 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 MOB3AQ96BX8 217 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 THOC3Q96J01 351 aaKnown RBP13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 SEC11CQ9BY50 192 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 TLNRD1Q9H1K6 362 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 TMEM231Q9H6L2 316 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 ZNF442Q9H7R0 627 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 ATPIF1Q9UII2 106 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 AMDHD2Q9Y303 409 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 EP300Q09472 2414 aaPredicted RBP13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 IGKV3D-15A0A087WSY6 115 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 E5RGE8 158 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 TSPAN9O75954 239 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 OR7C1O76099 320 aaPredicted RBP13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 PMELP40967 661 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 GLP1RP43220 463 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 UCP3P55916 312 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 PDCD1Q15116 288 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 PHLDA2Q53GA4 152 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 LIAT1Q6ZQX7 453 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 COLCA1Q6ZS62 124 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 RAB11FIP2Q7L804 512 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 LDLRAD3Q86YD5 345 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 TAAR9Q96RI9 348 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 STRADBQ9C0K7 418 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 NSG2Q9Y328 171 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 STARD10Q9Y365 291 aa13.01□□□□□ -0.33
TNFSF13-201ENST00000338784 MYO7BQ6PIF6 2116 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms