RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 FAM90A20PA6NIJ5 464 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FAM90A8PA6NJQ4 464 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FAM90A7PA6NKC0 464 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 C17orf100A8MU93 164 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FAM90A22PA8MWA6 464 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FAM90A12PA8MX19 464 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FAM90A5PA8MXJ8 464 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FAM90A23PA8MXZ1 464 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 M0R233 179 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 NOS1APO75052 506 aaPredicted RBP12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ACAA1P09110 424 aaPredicted RBP12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FAM90A15PP0C7V4 464 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FAM90A13PP0C7W8 464 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FAM90A14PP0C7W9 464 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 FAM90A24PP0C7X0 464 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 TNFSF4P23510 183 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 ARL6IP1Q15041 203 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 MZT2BQ6NZ67 158 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 MOGAT3Q86VF5 341 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 GVQW1Q8N7I0 195 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 CELF2-AS1Q8N7Q2 184 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 MINDY2Q8NBR6 621 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 DHRS9Q9BPW9 319 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 SULT4A1Q9BR01 284 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 IL19Q9UHD0 177 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 PKDREJQ9NTG1 2253 aa12.46□□□□□ -0.41
CDK5RAP3-201ENST00000338399 SERPINE3A8MV23 424 aa12.46□□□□□ -0.42
CDK5RAP3-201ENST00000338399 WNT9BO14905 357 aa12.46□□□□□ -0.42
CDK5RAP3-201ENST00000338399 PDCD6O75340 191 aa12.46□□□□□ -0.42
CDK5RAP3-201ENST00000338399 RNF224P0DH78 156 aa12.46□□□□□ -0.42
CDK5RAP3-201ENST00000338399 FUT3P21217 361 aa12.46□□□□□ -0.42
CDK5RAP3-201ENST00000338399 AP3S2P59780 193 aa12.46□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ACTBP60709 375 aa12.46□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ACTG1P63261 375 aa12.46□□□□□ -0.42
CDK5RAP3-201ENST00000338399 SSBP1Q04837 148 aaKnown RBP12.46□□□□□ -0.42
CDK5RAP3-201ENST00000338399 IKZF1Q13422 519 aa12.46□□□□□ -0.42
CDK5RAP3-201ENST00000338399 DYRK1AQ13627 763 aa12.46□□□□□ -0.42
CDK5RAP3-201ENST00000338399 MPV17LQ2QL34 196 aa12.46□□□□□ -0.42
CDK5RAP3-201ENST00000338399 MST1LQ2TV78 715 aa12.46□□□□□ -0.42
CDK5RAP3-201ENST00000338399 Q6ZNX1 250 aa12.46□□□□□ -0.42
CDK5RAP3-201ENST00000338399 LRRC29Q8WV35 223 aa12.46□□□□□ -0.42
CDK5RAP3-201ENST00000338399 WDR13Q9H1Z4 485 aa12.46□□□□□ -0.42
CDK5RAP3-201ENST00000338399 RALYQ9UKM9 306 aaKnown RBP12.46□□□□□ -0.42
CDK5RAP3-201ENST00000338399 UBE2QL1A1L167 161 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 CENPXA8MT69 81 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 B9A039 149 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 PRSS44E7EML9 344 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 MT-ND4P03905 459 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 CSF1P09603 554 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 IGFBP2P18065 325 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 GLRA1P23415 457 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 PMELP40967 661 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 IL13RA2Q14627 380 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 EFNB3Q15768 340 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 CCBE1Q6UXH8 406 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 LINC00596Q86U02 117 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 FAM222BQ8WU58 562 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 DIRC2Q96SL1 478 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 FN3KRPQ9HA64 309 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 HES4Q9HCC6 221 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 HRASLSQ9HDD0 168 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 DYNLRB1Q9NP97 96 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 TAS2R8Q9NYW2 309 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 AK3Q9UIJ7 227 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ABCA4P78363 2273 aa12.45□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ARFGEF3Q5TH69 2177 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ADH4P08319 380 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 CCL8P80075 99 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 FAAP20Q6NZ36 180 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 GLCCI1Q86VQ1 547 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 MUC15Q8N387 334 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 OR4S1Q8NGB4 309 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ENKURQ8TC29 256 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 DYRK2Q92630 601 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 HDHD3Q9BSH5 251 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 GCM1Q9NP62 436 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 IFT46Q9NQC8 304 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ZNF462Q96JM2 2506 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 DYSFO75923 2080 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 hCG_2014768A0A024R1R8 64 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 FAM240BA0A1B0GVZ2 78 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 TPD52L2O43399 206 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 CA11O75493 328 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 CD3DP04234 171 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 BTCP35070 178 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 RCVRNP35243 200 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 GATA4P43694 442 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ACP7Q6ZNF0 438 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ZNF554Q86TJ5 538 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 OR10Z1Q8NGY1 313 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 FBXW5Q969U6 566 aa12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 C7orf50Q9BRJ6 194 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 RCC2Q9P258 522 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-201ENST00000338399 HSPB6O14558 160 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 HS3ST1O14792 307 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 DEGS1O15121 323 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 CD55P08174 381 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 ZNF44P15621 663 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 EGR1P18146 543 aa12.43□□□□□ -0.42
CDK5RAP3-201ENST00000338399 HLA-DMAP28067 261 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms