RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 FAM90A15PP0C7V4 464 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 FAM90A13PP0C7W8 464 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 FAM90A14PP0C7W9 464 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 FAM90A24PP0C7X0 464 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 RBM11P57052 281 aaKnown RBP12.32□□□□□ -0.44
LIPA-202ENST00000336233 SPEM2Q0P670 501 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 TMEM268Q5VZI3 342 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 PLCXD3Q63HM9 321 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 TMEM211Q6ICI0 200 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 TMEM200AQ86VY9 491 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 ZNF845Q96IR2 970 aaPredicted RBP12.32□□□□□ -0.44
LIPA-202ENST00000336233 SUCNR1Q9BXA5 334 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 STRADBQ9C0K7 418 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 ZNF286AQ9HBT8 521 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 ACKR4Q9NPB9 350 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 ZNF850A8MQ14 1090 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 RPL36A-HNRNPH2H7BZ11 118 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 CST4P01036 141 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 RRADP55042 308 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 PIGPP57054 158 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 PJVKQ0ZLH3 352 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 PABPC1L2AQ5JQF8 200 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 MRPL24Q96A35 216 aaKnown RBP12.32□□□□□ -0.44
LIPA-202ENST00000336233 MOB3AQ96BX8 217 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 NARS2Q96I59 477 aaKnown RBP12.32□□□□□ -0.44
LIPA-202ENST00000336233 MICU1Q9BPX6 476 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 FAM173AQ9BQD7 235 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 ST3GAL6Q9Y274 331 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 KCNIP3Q9Y2W7 256 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 KMT2EQ8IZD2 1858 aa12.32□□□□□ -0.44
LIPA-202ENST00000336233 ABCD4O14678 606 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 OPRM1P35372 400 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 SMCO1Q147U7 214 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 Q6ZS49 121 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 SVBPQ8N300 66 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 OR5T2Q8NGG2 359 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 OR4A4PQ8NGN8 299 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 SLC39A7Q92504 469 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 MARS2Q96GW9 593 aaKnown RBP12.31□□□□□ -0.44
LIPA-202ENST00000336233 PRRX2Q99811 253 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 ZNF703Q9H7S9 590 aaPredicted RBP12.31□□□□□ -0.44
LIPA-202ENST00000336233 PLEKHA2Q9HB19 425 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 PPP1R14DQ9NXH3 145 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 H7C1Q1 480 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 COX5BP10606 129 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 ADCYAP1P18509 176 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 RPL12P30050 165 aaKnown RBP12.31□□□□□ -0.44
LIPA-202ENST00000336233 LHX2P50458 406 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 MALLQ13021 153 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 DAZAP2Q15038 168 aaPredicted RBP12.31□□□□□ -0.44
LIPA-202ENST00000336233 TSPO2Q5TGU0 170 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 SLC22A25Q6T423 547 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 CPEB3Q8NE35 698 aaKnown RBP12.31□□□□□ -0.44
LIPA-202ENST00000336233 OR2M7Q8NG81 312 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 C18orf12Q96KH6 178 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 TMEM68Q96MH6 324 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 LRFN1Q9P244 771 aa12.31□□□□□ -0.44
LIPA-202ENST00000336233 ZNF629Q9UEG4 869 aaPredicted RBP12.31□□□□□ -0.44
LIPA-202ENST00000336233 COLQQ9Y215 455 aaPredicted RBP12.31□□□□□ -0.44
LIPA-202ENST00000336233 SPEGQ15772 3267 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 A0A1B0GWJ7 208 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 ZNF705EA8MWA4 302 aaPredicted RBP12.3□□□□□ -0.44
LIPA-202ENST00000336233 K7EPK0 472 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 SIGLEC5O15389 551 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 CLN5O75503 358 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 PTAFRP25105 342 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 RAB13P51153 203 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 SIGLEC14Q08ET2 396 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 SRSF7Q16629 238 aaKnown RBP eCLIP12.3□□□□□ -0.44
LIPA-202ENST00000336233 RPL7L1Q6DKI1 246 aaKnown RBP12.3□□□□□ -0.44
LIPA-202ENST00000336233 RAB11FIP2Q7L804 512 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 SAXO1Q8IYX7 474 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 FAM71E2Q8N5Q1 922 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 TAF9BQ9HBM6 251 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 PARPBPQ9NWS1 579 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 AMDHD2Q9Y303 409 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 STARD10Q9Y365 291 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 PQLC2LA1A4F0 135 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 FAM74A7A6NL05 159 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 ZNF587BE7ETH6 402 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 NEURL1O76050 574 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 FUT3P21217 361 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 SULT1A2P50226 295 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 PRSS12P56730 875 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 FAM74A3Q4VXF1 159 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 ABCA11PQ4W5N1 156 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 RTN4IP1Q8WWV3 396 aaPredicted RBP12.3□□□□□ -0.44
LIPA-202ENST00000336233 THOC3Q96J01 351 aaKnown RBP12.3□□□□□ -0.44
LIPA-202ENST00000336233 TSNAXQ99598 290 aaKnown RBP12.3□□□□□ -0.44
LIPA-202ENST00000336233 RSRP1Q9BUV0 290 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 RNF122Q9H9V4 155 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 PURGQ9UJV8 347 aaKnown RBP12.3□□□□□ -0.44
LIPA-202ENST00000336233 SDK2Q58EX2 2172 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 MRPL33O75394 65 aaKnown RBP12.3□□□□□ -0.44
LIPA-202ENST00000336233 JTBO76095 146 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 CLDN18P56856 261 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 OR2A2Q6IF42 318 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 Q6ZPA2 131 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 LIAT1Q6ZQX7 453 aa12.3□□□□□ -0.44
LIPA-202ENST00000336233 BOLLQ8N9W6 283 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms