RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ZNF121P58317 390 aaPredicted RBP4.93□□□□□ -1.62
PTPRB-202ENST00000334414 CNEP1R1Q8N9A8 125 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 NEUROG1Q92886 237 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 WIPI2Q9Y4P8 454 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 SELENOPP49908 381 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 SLC35B1P78383 322 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 MRPL54Q6P161 138 aaKnown RBP4.93□□□□□ -1.62
PTPRB-202ENST00000334414 TEPPQ6URK8 271 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 NUBPLQ8TB37 319 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 SFRP2Q96HF1 295 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 ACSM5Q6NUN0 579 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 AGBL5Q8NDL9 886 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 Q96M85 177 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 RSRP1Q9BUV0 290 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 FAM234AQ9H0X4 552 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 HMX2A2RU54 273 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 PTP4A3O75365 173 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 PSMB5P28074 263 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 EPHA8P29322 1005 aaPredicted RBP4.93□□□□□ -1.62
PTPRB-202ENST00000334414 RELBQ01201 579 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 NKAIN4Q8IVV8 208 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 LRP12Q9Y561 859 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 SLC2A10O95528 541 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 DYNLT3P51808 116 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 C10orf113Q5VZT2 155 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 C16orf82Q7Z2V1 217 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 CA13Q8N1Q1 262 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 ZNF740Q8NDX6 193 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 OR1F12Q8NHA8 337 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 TMEM45BQ96B21 275 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 AQP10Q96PS8 301 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 NRIP2Q9BQI9 281 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 C11orf68Q9H3H3 251 aaKnown RBP4.93□□□□□ -1.62
PTPRB-202ENST00000334414 CARHSP1Q9Y2V2 147 aaKnown RBP4.93□□□□□ -1.62
PTPRB-202ENST00000334414 A0A087WUJ7 227 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 SYNGR2O43760 224 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 PRF1P14222 555 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 CD38P28907 300 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 OR1D5P58170 312 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 PPP2CAP67775 309 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 KCNAB1Q14722 419 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 RNPS1Q15287 305 aaKnown RBP4.93□□□□□ -1.62
PTPRB-202ENST00000334414 TMEM211Q6ICI0 200 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 RBM45Q8IUH3 476 aaKnown RBP4.93□□□□□ -1.62
PTPRB-202ENST00000334414 SLC16A11Q8NCK7 471 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 OOEPA6NGQ2 149 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 MOGAT1Q96PD6 335 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 IL23AQ9NPF7 189 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 SLC25A17O43808 307 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 CTSVO60911 334 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 PDCD6O75340 191 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 SNAI1O95863 264 aaPredicted RBP4.93□□□□□ -1.62
PTPRB-202ENST00000334414 LSM11P83369 360 aaKnown RBP eCLIP4.93□□□□□ -1.62
PTPRB-202ENST00000334414 ZNF117Q03924 483 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 ZCCHC14Q8WYQ9 949 aaKnown RBP4.93□□□□□ -1.62
PTPRB-202ENST00000334414 SLCO1C1Q9NYB5 712 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 PIAS3Q9Y6X2 628 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 MYADML2A6NDP7 307 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 FBLL1A6NHQ2 334 aaKnown RBP4.93□□□□□ -1.62
PTPRB-202ENST00000334414 SDCBPO00560 298 aaPredicted RBP4.93□□□□□ -1.62
PTPRB-202ENST00000334414 IL4P05112 153 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 LINC01559Q495D7 138 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 PAPPA-AS1Q5QFB9 102 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 SAMD13Q5VXD3 122 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 FAM169BQ8N8A8 192 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 WBP2Q969T9 261 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 KCNS1Q96KK3 526 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 TINAGL1Q9GZM7 467 aaPredicted RBP4.93□□□□□ -1.62
PTPRB-202ENST00000334414 MMP25Q9NPA2 562 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 FBXO4Q9UKT5 387 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 SH2D7A6NKC9 451 aaPredicted RBP4.93□□□□□ -1.62
PTPRB-202ENST00000334414 RPL30P62888 115 aaKnown RBP4.93□□□□□ -1.62
PTPRB-202ENST00000334414 TCF23Q7RTU1 214 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 OR10AG1Q8NH19 301 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 TEX37Q96LM6 180 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 TOX2Q96NM4 488 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 RCC2Q9P258 522 aaKnown RBP4.93□□□□□ -1.62
PTPRB-202ENST00000334414 B9D1Q9UPM9 204 aa4.93□□□□□ -1.62
PTPRB-202ENST00000334414 RECKO95980 971 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 HPXP02790 462 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 GPR3P46089 330 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 SLC37A1P57057 533 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 KLF3P57682 345 aaPredicted RBP4.92□□□□□ -1.62
PTPRB-202ENST00000334414 FAM53BQ14153 422 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 TUSC1Q2TAM9 212 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 DEFB110Q30KQ9 67 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 POC1AQ8NBT0 407 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 GPA33Q99795 319 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 FAM90A26D6RGX4 464 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 M0R3E3 92 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 CYR61O00622 381 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 TMPRSS11DO60235 418 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 PPP1R17O96001 155 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 PGGT1BP53609 377 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 SCCPDHQ8NBX0 429 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 SNRNP40Q96DI7 357 aaKnown RBP4.92□□□□□ -1.62
PTPRB-202ENST00000334414 GGACTQ9BVM4 153 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 GJB3O75712 270 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 HLA-DRB1P01911 266 aa4.92□□□□□ -1.62
PTPRB-202ENST00000334414 MELTFP08582 738 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms