RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TM4SF5O14894 197 aa10.36□□□□□ -0.75
HDAC6-201ENST00000334136 OR5H8P0DN80 308 aa10.36□□□□□ -0.75
HDAC6-201ENST00000334136 CTLA4P16410 223 aa10.36□□□□□ -0.75
HDAC6-201ENST00000334136 IL11P20809 199 aa10.36□□□□□ -0.75
HDAC6-201ENST00000334136 IGF2-ASQ6U949 168 aa10.36□□□□□ -0.75
HDAC6-201ENST00000334136 PUSL1Q8N0Z8 303 aaKnown RBP10.36□□□□□ -0.75
HDAC6-201ENST00000334136 OR1J1Q8NGS3 322 aa10.36□□□□□ -0.75
HDAC6-201ENST00000334136 PBOV1Q9GZY1 135 aa10.36□□□□□ -0.75
HDAC6-201ENST00000334136 ZCCHC4Q9H5U6 513 aa10.36□□□□□ -0.75
HDAC6-201ENST00000334136 GPR173Q9NS66 373 aa10.36□□□□□ -0.75
HDAC6-201ENST00000334136 TIMM10BQ9Y5J6 103 aa10.36□□□□□ -0.75
HDAC6-201ENST00000334136 ROS1P08922 2347 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 OR4C45A6NMZ5 311 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 CEBPZOSA8MTT3 80 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 WDR1O75083 606 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 HOXD4P09016 255 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-201ENST00000334136 NKX2-1P43699 371 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-201ENST00000334136 TLE4Q04727 773 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 GUK1Q16774 197 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 NECAP1Q8NC96 275 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 OR52N4Q8NGI2 321 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 SEH1LQ96EE3 360 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 PGLYRP3Q96LB9 341 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 USB1Q9BQ65 265 aaKnown RBP10.35□□□□□ -0.75
HDAC6-201ENST00000334136 SUCNR1Q9BXA5 334 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 TOLLIPQ9H0E2 274 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 MMP26Q9NRE1 261 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 DEPPQ9NTK1 212 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 COL4A2P08572 1712 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 hCG_1809904A0A1W2PP81 198 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 A0A1W2PR64 198 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 A0A1W2PRV1 198 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 H3BP45 60 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 CYB5BO43169 146 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 CDAP32320 146 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 RIN1Q13671 783 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 CNN3Q15417 329 aaKnown RBP10.35□□□□□ -0.75
HDAC6-201ENST00000334136 RGS7BPQ6MZT1 257 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-201ENST00000334136 NR2C2APQ86WQ0 139 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 TMEM104Q8NE00 496 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 OR51H1Q8NH63 302 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 EMG1Q92979 244 aaKnown RBP10.35□□□□□ -0.75
HDAC6-201ENST00000334136 CST7O76096 145 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 PIGPP57054 158 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 CST9LP1Q5W188 147 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 OR10D4PQ8NGN7 298 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 OR6S1Q8NH40 331 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 SLC25A38Q96DW6 304 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 TSPAN32Q96QS1 320 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 GAR1Q9NY12 217 aaKnown RBP10.35□□□□□ -0.75
HDAC6-201ENST00000334136 MIOXQ9UGB7 285 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 ZMIZ1Q9ULJ6 1067 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 AMDHD2Q9Y303 409 aa10.35□□□□□ -0.75
HDAC6-201ENST00000334136 TP53BP1Q12888 1972 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-201ENST00000334136 ANGPTL7O43827 346 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 CLPSP04118 112 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 NHLRC3Q5JS37 347 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 C1orf185Q5T7R7 199 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 OR6X1Q8NH79 312 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 RTN4IP1Q8WWV3 396 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-201ENST00000334136 SGK3Q96BR1 496 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 ARHGAP5-AS1Q96IT6 56 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 TIMP4Q99727 224 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 MFSD2BA6NFX1 497 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 ELLP55199 621 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-201ENST00000334136 SSBP1Q04837 148 aaKnown RBP10.34□□□□□ -0.75
HDAC6-201ENST00000334136 ADAMTS17Q8TE56 1095 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 TMPRSS13Q9BYE2 586 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 PLK3Q9H4B4 646 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 CNTD2Q9H8S5 307 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 PATZ1Q9HBE1 687 aaKnown RBP10.34□□□□□ -0.75
HDAC6-201ENST00000334136 RASL12Q9NYN1 266 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-201ENST00000334136 ZIC3O60481 467 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 ARR3P36575 388 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 ZP1P60852 638 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 ECH1Q13011 328 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 TBC1D28Q2M2D7 210 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 TMEM268Q5VZI3 342 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 RTL6Q6ICC9 239 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 IL34Q6ZMJ4 242 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 MKXQ8IYA7 352 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 PHYHIPLQ96FC7 376 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 RTN4RQ9BZR6 473 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 SLC39A9Q9NUM3 307 aa10.34□□□□□ -0.75
HDAC6-201ENST00000334136 HSPB2A8KAH6 182 aa10.33□□□□□ -0.76
HDAC6-201ENST00000334136 DUS4LO95620 317 aaKnown RBP10.33□□□□□ -0.76
HDAC6-201ENST00000334136 CRYAAP02489 173 aa10.33□□□□□ -0.76
HDAC6-201ENST00000334136 CRHP06850 196 aa10.33□□□□□ -0.76
HDAC6-201ENST00000334136 SLC25A1P53007 311 aa10.33□□□□□ -0.76
HDAC6-201ENST00000334136 PDCD1Q15116 288 aa10.33□□□□□ -0.76
HDAC6-201ENST00000334136 HSPB2Q16082 182 aa10.33□□□□□ -0.76
HDAC6-201ENST00000334136 ATRAIDQ6UW56 229 aa10.33□□□□□ -0.76
HDAC6-201ENST00000334136 ZGRF1Q86YA3 2104 aa10.33□□□□□ -0.76
HDAC6-201ENST00000334136 ASB13Q8WXK3 278 aa10.33□□□□□ -0.76
HDAC6-201ENST00000334136 RGP1Q92546 391 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-201ENST00000334136 MCHR2Q969V1 340 aa10.33□□□□□ -0.76
HDAC6-201ENST00000334136 SAMD10Q9BYL1 202 aa10.33□□□□□ -0.76
HDAC6-201ENST00000334136 DUSP13Q9UII6 198 aa10.33□□□□□ -0.76
HDAC6-201ENST00000334136 GDF2Q9UK05 429 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms