RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 LRTM2Q8N967 370 aa20.54■□□□□ 0.88
TSKU-201ENST00000333090 ZFP62Q8NB50 900 aaPredicted RBP20.54■□□□□ 0.88
TSKU-201ENST00000333090 OR2G3Q8NGZ4 309 aa20.54■□□□□ 0.88
TSKU-201ENST00000333090 OR2AE1Q8NHA4 323 aa20.54■□□□□ 0.88
TSKU-201ENST00000333090 YPEL4Q96NS1 127 aa20.54■□□□□ 0.88
TSKU-201ENST00000333090 CD27P26842 260 aa20.54■□□□□ 0.88
TSKU-201ENST00000333090 JSRP1Q96MG2 331 aaPredicted RBP20.54■□□□□ 0.88
TSKU-201ENST00000333090 OMGP23515 440 aa20.53■□□□□ 0.88
TSKU-201ENST00000333090 MAS1LP35410 378 aa20.53■□□□□ 0.88
TSKU-201ENST00000333090 OR2M3Q8NG83 312 aa20.53■□□□□ 0.88
TSKU-201ENST00000333090 MUCL1Q96DR8 90 aa20.53■□□□□ 0.88
TSKU-201ENST00000333090 RBM24Q9BX46 236 aaKnown RBP20.53■□□□□ 0.88
TSKU-201ENST00000333090 FAM24AA6NFZ4 105 aa20.53■□□□□ 0.88
TSKU-201ENST00000333090 WRBO00258 174 aa20.53■□□□□ 0.88
TSKU-201ENST00000333090 NDUFS6O75380 124 aaKnown RBP20.53■□□□□ 0.88
TSKU-201ENST00000333090 HOXA5P20719 270 aa20.53■□□□□ 0.88
TSKU-201ENST00000333090 NDUFA6P56556 154 aa20.53■□□□□ 0.88
TSKU-201ENST00000333090 SLC35G3Q8N808 338 aa20.53■□□□□ 0.88
TSKU-201ENST00000333090 SUMF1Q8NBK3 374 aa20.53■□□□□ 0.88
TSKU-201ENST00000333090 RNF138Q8WVD3 245 aa20.53■□□□□ 0.88
TSKU-201ENST00000333090 SGK3Q96BR1 496 aa20.53■□□□□ 0.88
TSKU-201ENST00000333090 BOD1Q96IK1 185 aa20.53■□□□□ 0.88
TSKU-201ENST00000333090 RBFOX3A6NFN3 312 aa20.52■□□□□ 0.88
TSKU-201ENST00000333090 H3BQ15 152 aa20.52■□□□□ 0.88
TSKU-201ENST00000333090 DTYMKP23919 212 aa20.52■□□□□ 0.88
TSKU-201ENST00000333090 CPEB2Q7Z5Q1 589 aaKnown RBP20.52■□□□□ 0.88
TSKU-201ENST00000333090 SYT3Q9BQG1 590 aa20.52■□□□□ 0.88
TSKU-201ENST00000333090 DMRT1Q9Y5R6 373 aa20.52■□□□□ 0.88
TSKU-201ENST00000333090 URGCP-MRPS24S4R325 110 aa20.52■□□□□ 0.88
TSKU-201ENST00000333090 PYY3Q5JQD4 70 aa20.52■□□□□ 0.87
TSKU-201ENST00000333090 ZNF600Q6ZNG1 722 aa20.52■□□□□ 0.87
TSKU-201ENST00000333090 RAB39BQ96DA2 213 aa20.52■□□□□ 0.87
TSKU-201ENST00000333090 ZNF700Q9H0M5 742 aa20.52■□□□□ 0.87
TSKU-201ENST00000333090 ZNF576Q9H609 170 aa20.52■□□□□ 0.87
TSKU-201ENST00000333090 MYOTQ9UBF9 498 aa20.52■□□□□ 0.87
TSKU-201ENST00000333090 IGHV3-15A0A0B4J1V0 119 aa20.51■□□□□ 0.87
TSKU-201ENST00000333090 IFITM10A6NMD0 228 aa20.51■□□□□ 0.87
TSKU-201ENST00000333090 GEMIN2O14893 280 aaKnown RBP20.51■□□□□ 0.87
TSKU-201ENST00000333090 ATP6V0CP27449 155 aa20.51■□□□□ 0.87
TSKU-201ENST00000333090 TAGLN2P37802 199 aaKnown RBP20.51■□□□□ 0.87
TSKU-201ENST00000333090 HAGHQ16775 308 aa20.51■□□□□ 0.87
TSKU-201ENST00000333090 PIGYQ3MUY2 71 aa20.51■□□□□ 0.87
TSKU-201ENST00000333090 PRAMEF20Q5VT98 475 aa20.51■□□□□ 0.87
TSKU-201ENST00000333090 ZNF343Q6P1L6 599 aa20.51■□□□□ 0.87
TSKU-201ENST00000333090 OR2C3Q8N628 320 aa20.51■□□□□ 0.87
TSKU-201ENST00000333090 OR5L2Q8NGL0 311 aa20.51■□□□□ 0.87
TSKU-201ENST00000333090 PFDN5Q99471 154 aa20.51■□□□□ 0.87
TSKU-201ENST00000333090 TGIF2Q9GZN2 237 aa20.51■□□□□ 0.87
TSKU-201ENST00000333090 HSF4Q9ULV5 492 aa20.51■□□□□ 0.87
TSKU-201ENST00000333090 A0A1B0GW64 132 aa20.51■□□□□ 0.87
TSKU-201ENST00000333090 GATCO43716 136 aaKnown RBP20.51■□□□□ 0.87
TSKU-201ENST00000333090 TP53RKQ96S44 253 aa20.51■□□□□ 0.87
TSKU-201ENST00000333090 WDR77Q9BQA1 342 aaPredicted RBP20.51■□□□□ 0.87
TSKU-201ENST00000333090 IGKV1-27A0A075B6S5 117 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 YKT6O15498 198 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 PNLIPP16233 465 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 CDX1P47902 265 aaPredicted RBP20.5■□□□□ 0.87
TSKU-201ENST00000333090 ZNF674Q2M3X9 581 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 HIKESHIQ53FT3 197 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 ZNF385AQ96PM9 386 aaKnown RBP20.5■□□□□ 0.87
TSKU-201ENST00000333090 DOK5Q9P104 306 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 CELSR3Q9NYQ7 3312 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 IGLV3-32A0A0A0MS00 114 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 H0YL77 283 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 ONECUT2O95948 504 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 S100A2P29034 98 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 RND3P61587 244 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 PDCD1Q15116 288 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 OR10AD1Q8NGE0 317 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 OR4D5Q8NGN0 318 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 OR14L1PQ8NHC6 308 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 NABP1Q96AH0 204 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 ANGPTL4Q9BY76 406 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 TMED3Q9Y3Q3 217 aa20.5■□□□□ 0.87
TSKU-201ENST00000333090 CCDC85CA6NKD9 419 aa20.49■□□□□ 0.87
TSKU-201ENST00000333090 OTX1P32242 354 aaPredicted RBP20.49■□□□□ 0.87
TSKU-201ENST00000333090 UBE2KP61086 200 aa20.49■□□□□ 0.87
TSKU-201ENST00000333090 ZNF266Q14584 549 aa20.49■□□□□ 0.87
TSKU-201ENST00000333090 NKAIN1Q4KMZ8 207 aa20.49■□□□□ 0.87
TSKU-201ENST00000333090 CDPF1Q6NVV7 123 aa20.49■□□□□ 0.87
TSKU-201ENST00000333090 ZNF574Q6ZN55 896 aaPredicted RBP20.49■□□□□ 0.87
TSKU-201ENST00000333090 CARFQ8N187 725 aa20.49■□□□□ 0.87
TSKU-201ENST00000333090 FBXL14Q8N1E6 418 aa20.49■□□□□ 0.87
TSKU-201ENST00000333090 LIPGQ9Y5X9 500 aa20.49■□□□□ 0.87
TSKU-201ENST00000333090 ZNF729A6NN14 1252 aaPredicted RBP20.49■□□□□ 0.87
TSKU-201ENST00000333090 NR2C1P13056 603 aa20.49■□□□□ 0.87
TSKU-201ENST00000333090 RHBDD2Q6NTF9 364 aa20.49■□□□□ 0.87
TSKU-201ENST00000333090 SPTSSAQ969W0 71 aa20.49■□□□□ 0.87
TSKU-201ENST00000333090 C10orf35Q96D05 121 aa20.49■□□□□ 0.87
TSKU-201ENST00000333090 SMDT1Q9H4I9 107 aa20.49■□□□□ 0.87
TSKU-201ENST00000333090 MTCH2Q9Y6C9 303 aa20.49■□□□□ 0.87
TSKU-201ENST00000333090 NKX2-6A6NCS4 301 aa20.48■□□□□ 0.87
TSKU-201ENST00000333090 SPSB3Q6PJ21 355 aa20.48■□□□□ 0.87
TSKU-201ENST00000333090 Q8WTZ3 238 aa20.48■□□□□ 0.87
TSKU-201ENST00000333090 SPSB1Q96BD6 273 aa20.48■□□□□ 0.87
TSKU-201ENST00000333090 NTNG2Q96CW9 530 aa20.48■□□□□ 0.87
TSKU-201ENST00000333090 UNKLQ9H9P5 680 aaKnown RBP20.48■□□□□ 0.87
TSKU-201ENST00000333090 IGSF23A1L1A6 192 aa20.48■□□□□ 0.87
TSKU-201ENST00000333090 HERV-K104P61576 105 aa20.48■□□□□ 0.87
TSKU-201ENST00000333090 SHBQ15464 509 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms