RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 FAM222BQ8WU58 562 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 SNRNP40Q96DI7 357 aaKnown RBP14.67□□□□□ -0.06
PTCH1-201ENST00000331920 C6orf106Q9H6K1 298 aaPredicted RBP14.67□□□□□ -0.06
PTCH1-201ENST00000331920 NID2Q14112 1375 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 TCEAL1Q15170 157 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 LAT2Q9GZY6 243 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 HPXP02790 462 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 HLA-GP17693 338 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 CD27P26842 260 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 ZNF766Q5HY98 468 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 RNF165Q6ZSG1 346 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 ARHGAP5-AS1Q96IT6 56 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 HIST1H4GQ99525 98 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 CES1P1Q9UKY3 287 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 OR5AC1P0C628 307 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 RHBDD2Q6NTF9 364 aa14.67□□□□□ -0.06
PTCH1-201ENST00000331920 NUFIP2Q7Z417 695 aaKnown RBP14.67□□□□□ -0.06
PTCH1-201ENST00000331920 APOBEC3DQ96AK3 386 aaPredicted RBP14.67□□□□□ -0.06
PTCH1-201ENST00000331920 AURKAIP1Q9NWT8 199 aaPredicted RBP14.67□□□□□ -0.06
PTCH1-201ENST00000331920 TRAV8-7A0A075B6U6 113 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 A0A1W2PPC4 97 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 DUXBA0A1W2PPF3 345 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 CLDN34H7C241 214 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 LANCL1O43813 399 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 GABRA1P14867 456 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 CD22P20273 847 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 LINC00303Q3SY05 128 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 SCMH1Q96GD3 660 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 WDR13Q9H1Z4 485 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 DUSP21Q9H596 190 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 AKAP12Q02952 1782 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 TRBV23-1A0A0A0MS06 115 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 TMEM262E9PQX1 116 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 DHRS3O75911 302 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 ZNF26P17031 533 aaPredicted RBP14.66□□□□□ -0.06
PTCH1-201ENST00000331920 C20orf27Q9GZN8 174 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 FUT9Q9Y231 359 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 CD99P14209 185 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 NPPBP16860 134 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 CEACAM3P40198 252 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 FAM53AQ6NSI3 398 aaPredicted RBP14.66□□□□□ -0.06
PTCH1-201ENST00000331920 SIGLEC11Q96RL6 698 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 CMC2Q9NRP2 79 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 SNRPCP09234 159 aaKnown RBP14.66□□□□□ -0.06
PTCH1-201ENST00000331920 OR1F12Q8NHA8 337 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 AQP10Q96PS8 301 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 A0A1W2PR48 441 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 HIST1H1EP10412 219 aaKnown RBP14.66□□□□□ -0.06
PTCH1-201ENST00000331920 ZP3P21754 424 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 IER3P46695 156 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 Q6ZNX1 250 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 KCNMB2Q9Y691 235 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 DNAL4O96015 105 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 SLC6A1P30531 599 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 GNG3P63215 75 aa14.66□□□□□ -0.06
PTCH1-201ENST00000331920 SNRPGP15A8MWD9 76 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 C11orf94C9JXX5 98 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 Q7L0L9 218 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 PDLIM5Q96HC4 596 aaKnown RBP14.65□□□□□ -0.06
PTCH1-201ENST00000331920 OR2W5A6NFC9 320 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 BEND2Q8NDZ0 799 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 TM4SF19Q96DZ7 209 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 CRYABP02511 175 aaKnown RBP14.65□□□□□ -0.06
PTCH1-201ENST00000331920 C16orf52Q8NHV5 167 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 ISOC2Q96AB3 205 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 DOCK9Q9BZ29 2069 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 LBHQ53QV2 105 aaPredicted RBP14.65□□□□□ -0.06
PTCH1-201ENST00000331920 PARM1Q6UWI2 310 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 IP6K3Q96PC2 410 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 SLC25A33Q9BSK2 321 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 GPX5O75715 221 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 C10orf126Q8N4M7 172 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 RASL12Q9NYN1 266 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 EXOGQ9Y2C4 368 aaKnown RBP14.65□□□□□ -0.06
PTCH1-201ENST00000331920 LRP12Q9Y561 859 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 METAP1P53582 386 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 MEIG1Q5JSS6 88 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 MEGF10Q96KG7 1140 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 ZFP30Q9Y2G7 519 aa14.65□□□□□ -0.06
PTCH1-201ENST00000331920 TMEM129A0AVI4 362 aa14.64□□□□□ -0.07
PTCH1-201ENST00000331920 ID1P41134 155 aa14.64□□□□□ -0.07
PTCH1-201ENST00000331920 TMEM229BQ8NBD8 167 aa14.64□□□□□ -0.07
PTCH1-201ENST00000331920 OR2V1Q8NHB1 315 aa14.64□□□□□ -0.07
PTCH1-201ENST00000331920 F11RQ9Y624 299 aaKnown RBP14.64□□□□□ -0.07
PTCH1-201ENST00000331920 SRSF10O75494 262 aaKnown RBP14.64□□□□□ -0.07
PTCH1-201ENST00000331920 ABLIM2Q6H8Q1 611 aa14.64□□□□□ -0.07
PTCH1-201ENST00000331920 SLC35B1P78383 322 aa14.64□□□□□ -0.07
PTCH1-201ENST00000331920 MPV17LQ2QL34 196 aa14.64□□□□□ -0.07
PTCH1-201ENST00000331920 GBGT1Q8N5D6 347 aa14.64□□□□□ -0.07
PTCH1-201ENST00000331920 C11orf68Q9H3H3 251 aaKnown RBP14.64□□□□□ -0.07
PTCH1-201ENST00000331920 ACER3Q9NUN7 267 aa14.64□□□□□ -0.07
PTCH1-201ENST00000331920 SPNP16150 400 aa14.64□□□□□ -0.07
PTCH1-201ENST00000331920 CACNA1SQ13698 1873 aa14.64□□□□□ -0.07
PTCH1-201ENST00000331920 B4E171 279 aa14.64□□□□□ -0.07
PTCH1-201ENST00000331920 FGF17O60258 216 aa14.64□□□□□ -0.07
PTCH1-201ENST00000331920 CGB2Q6NT52 195 aa14.64□□□□□ -0.07
PTCH1-201ENST00000331920 OR10G8Q8NGN5 311 aa14.64□□□□□ -0.07
PTCH1-201ENST00000331920 OR2T10Q8NGZ9 312 aa14.64□□□□□ -0.07
PTCH1-201ENST00000331920 PHOSPHO2Q8TCD6 241 aa14.64□□□□□ -0.07
PTCH1-201ENST00000331920 PERPQ96FX8 193 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms