RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 DOLPP1Q86YN1 238 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 OR5L1Q8NGL2 311 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 TOMM40LQ969M1 308 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 URM1Q9BTM9 101 aaKnown RBP13.74□□□□□ -0.21
PDGFB-201ENST00000331163 CST11Q9H112 138 aa13.74□□□□□ -0.21
PDGFB-201ENST00000331163 NAV2Q8IVL1 2488 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 C13orf42A0A1B0GVH6 325 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 OR14I1A6ND48 311 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 IGHV3-13P01766 116 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 IGHV3-7P01780 117 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 PI3P19957 117 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 LRRTM1Q86UE6 522 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 FBXL14Q8N1E6 418 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 GVQW1Q8N7I0 195 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 OR1S2Q8NGQ3 325 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 NABP1Q96AH0 204 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 RNF122Q9H9V4 155 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 ZMAT5Q9UDW3 170 aaKnown RBP13.73□□□□□ -0.21
PDGFB-201ENST00000331163 NUP210LQ5VU65 1888 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 AMY2AP04746 511 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 EDDM3AQ14507 147 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 ZNF826PQ6ZT77 177 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 C1QL2Q7Z5L3 287 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 HSD17B13Q7Z5P4 300 aaPredicted RBP13.73□□□□□ -0.21
PDGFB-201ENST00000331163 ZNF584Q8IVC4 421 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 BPIFB2Q8N4F0 458 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 OR1K1Q8NGR3 316 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 OR2S2Q9NQN1 319 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 FOXJ3Q9UPW0 622 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 CD300LBA8K4G0 201 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 AQP7O14520 342 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 HSPA12AO43301 675 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 NDUFB6O95139 128 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 CPN1P15169 458 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 ATP1B3P54709 279 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 PPP1CBP62140 327 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 RBM39Q14498 530 aaKnown RBP13.73□□□□□ -0.21
PDGFB-201ENST00000331163 CYYR1Q96J86 154 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 BCL2L14Q9BZR8 327 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 DYNLRB1Q9NP97 96 aa13.73□□□□□ -0.21
PDGFB-201ENST00000331163 SONP18583 2426 aaKnown RBP13.73□□□□□ -0.21
PDGFB-201ENST00000331163 SETD2Q9BYW2 2564 aaPredicted RBP13.73□□□□□ -0.21
PDGFB-201ENST00000331163 LOC100289279A0A1B0GTE1 492 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 PRSS44E7EML9 344 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 TFF1P04155 84 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 PRDX4Q13162 271 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 RBMS2Q15434 407 aaKnown RBP13.72□□□□□ -0.21
PDGFB-201ENST00000331163 UBE2V2Q15819 145 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 MYPOPQ86VE0 399 aaPredicted RBP13.72□□□□□ -0.21
PDGFB-201ENST00000331163 PUSL1Q8N0Z8 303 aaKnown RBP13.72□□□□□ -0.21
PDGFB-201ENST00000331163 ARMC10Q8N2F6 343 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 APOBEC3DQ96AK3 386 aaPredicted RBP13.72□□□□□ -0.21
PDGFB-201ENST00000331163 SEH1LQ96EE3 360 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 POFUT1Q9H488 388 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 ESRP2Q9H6T0 727 aaKnown RBP13.72□□□□□ -0.21
PDGFB-201ENST00000331163 NAP1L6A6NFF2 107 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 NDUFA2O43678 99 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 NXPH2O95156 264 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 OR8G1Q15617 311 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 MOGAT2Q3SYC2 334 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 DEGS2Q6QHC5 323 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 BEND4Q6ZU67 534 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 STEAP2Q8NFT2 490 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 HAVCR2Q8TDQ0 301 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 RAB3CQ96E17 227 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 WDR13Q9H1Z4 485 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 PCDHB10Q9UN67 800 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 ANKRD20A5PA0PJZ0 165 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 TUBAL3A6NHL2 446 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 TRAPPC2LH3BP13 241 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 SLC33A1O00400 549 aaPredicted RBP13.72□□□□□ -0.21
PDGFB-201ENST00000331163 ABCD4O14678 606 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 CDIPTO14735 213 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 RHOUQ7L0Q8 258 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 C6orf201Q7Z4U5 140 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 RTN4RL2Q86UN3 420 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 SPICQ8N5J4 248 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 RNF138Q8WVD3 245 aa13.72□□□□□ -0.21
PDGFB-201ENST00000331163 TMEM272A0A1B0GTI8 110 aa13.71□□□□□ -0.21
PDGFB-201ENST00000331163 A1L4Q6 167 aa13.71□□□□□ -0.21
PDGFB-201ENST00000331163 MGMTP16455 207 aa13.71□□□□□ -0.21
PDGFB-201ENST00000331163 OLFML2AQ68BL7 652 aa13.71□□□□□ -0.21
PDGFB-201ENST00000331163 BAIAP2L2Q6UXY1 529 aa13.71□□□□□ -0.21
PDGFB-201ENST00000331163 TRAPPC6BQ86SZ2 158 aa13.71□□□□□ -0.21
PDGFB-201ENST00000331163 FOXRED2Q8IWF2 684 aa13.71□□□□□ -0.21
PDGFB-201ENST00000331163 SPAG16Q8N0X2 631 aa13.71□□□□□ -0.21
PDGFB-201ENST00000331163 SOCS1O15524 211 aa13.71□□□□□ -0.22
PDGFB-201ENST00000331163 LILRA1O75019 489 aa13.71□□□□□ -0.22
PDGFB-201ENST00000331163 AMY2BP19961 511 aa13.71□□□□□ -0.22
PDGFB-201ENST00000331163 GALP22466 123 aa13.71□□□□□ -0.22
PDGFB-201ENST00000331163 PPA1Q15181 289 aa13.71□□□□□ -0.22
PDGFB-201ENST00000331163 CNN3Q15417 329 aaKnown RBP13.71□□□□□ -0.22
PDGFB-201ENST00000331163 C10orf128Q5T292 105 aa13.71□□□□□ -0.22
PDGFB-201ENST00000331163 MKXQ8IYA7 352 aa13.71□□□□□ -0.22
PDGFB-201ENST00000331163 KIAA1549Q9HCM3 1950 aa13.71□□□□□ -0.22
PDGFB-201ENST00000331163 ADAMTS20P59510 1910 aa13.71□□□□□ -0.22
PDGFB-201ENST00000331163 TRAV1-2A0A0B4J238 106 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 SIRPB1O00241 398 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 KNG1P01042 644 aa13.7□□□□□ -0.22
PDGFB-201ENST00000331163 PMP2P02689 132 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms