RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 COL9A1P20849 921 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 P2RY4P51582 365 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 TFF2Q03403 129 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 FZD2Q14332 565 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 CYB5R2Q6BCY4 276 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 OR4A16Q8NH70 328 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 C12orf49Q9H741 205 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 TMEM74BQ9NUR3 256 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 IL17BQ9UHF5 180 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 TRAPPC1Q9Y5R8 145 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 SCN4AP35499 1836 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 NKX2-6A6NCS4 301 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 AQP7O14520 342 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 SPINT1O43278 529 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 EWSR1Q01844 656 aaKnown RBP eCLIP12.4□□□□□ -0.42
EPHB3-201ENST00000330394 ZNF816Q0VGE8 651 aaPredicted RBP12.4□□□□□ -0.42
EPHB3-201ENST00000330394 LHFPL2Q6ZUX7 228 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 GPHA2Q96T91 129 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 LRRC61Q9BV99 259 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 GPR132Q9UNW8 380 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 ZNF236Q9UL36 1845 aa12.4□□□□□ -0.42
EPHB3-201ENST00000330394 GATCO43716 136 aaKnown RBP12.39□□□□□ -0.43
EPHB3-201ENST00000330394 CTSBP07858 339 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 IL11P20809 199 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 MMP16P51512 607 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 RPP30P78346 268 aaKnown RBP12.39□□□□□ -0.43
EPHB3-201ENST00000330394 ZNF92Q03936 586 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 CEACAM16Q2WEN9 425 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 COL13A1Q5TAT6 717 aaPredicted RBP12.39□□□□□ -0.43
EPHB3-201ENST00000330394 CNEP1R1Q8N9A8 125 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 NANOS1Q8WY41 292 aaKnown RBP12.39□□□□□ -0.43
EPHB3-201ENST00000330394 NTNG2Q96CW9 530 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 OBP2AQ9NY56 170 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 VAMP5O95183 116 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 CST2P09228 141 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 CTXN2P0C2S0 81 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 ERGP11308 486 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 COX5AP20674 150 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 HIST1H3AP68431 136 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 ARG2P78540 354 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 DHRS7BQ6IAN0 325 aaPredicted RBP12.39□□□□□ -0.43
EPHB3-201ENST00000330394 ZNF774Q6NX45 483 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 OR11L1Q8NGX0 322 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 OR13G1Q8NGZ3 307 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 ZNF586Q9NXT0 402 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 CACNG5Q9UF02 275 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 TIMM10BQ9Y5J6 103 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 LCTP09848 1927 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 TNFSF11O14788 317 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 BCAT2O15382 392 aaPredicted RBP12.39□□□□□ -0.43
EPHB3-201ENST00000330394 CD1AP06126 327 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 GPM6AP51674 278 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 VAMP3Q15836 100 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 ZNF343Q6P1L6 599 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 LIAT1Q6ZQX7 453 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 MYPOPQ86VE0 399 aaPredicted RBP12.39□□□□□ -0.43
EPHB3-201ENST00000330394 HOGA1Q86XE5 327 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 AICDAQ9GZX7 198 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 MTCH1Q9NZJ7 389 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 PARP14Q460N5 1801 aa12.39□□□□□ -0.43
EPHB3-201ENST00000330394 TRBV5-7A0A0A0MS05 114 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 ANKUB1A6NFN9 424 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 AQP7P3A6NL99 342 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 F6UZH7 168 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 ACAA1P09110 424 aaPredicted RBP12.38□□□□□ -0.43
EPHB3-201ENST00000330394 ASAH2BP0C7U1 165 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 SEC11BP0C7V7 166 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 PMCHP20382 165 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 LBX1P52954 281 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 SELENOVP59797 346 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 TMEM240Q5SV17 173 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 SLC35G3Q8N808 338 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 SHDQ96IW2 340 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 RARRES2Q99969 163 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 LPAR5Q9H1C0 372 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 PILRAQ9UKJ1 303 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 FUT9Q9Y231 359 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 ZNF737O75373 536 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 EDDM3BP56851 147 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 CLN3Q13286 438 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 BSXQ3C1V8 233 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 PRAMEF5Q5TYX0 476 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 PRAMEF6Q5VXH4 476 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 ZNF385CQ66K41 422 aaPredicted RBP12.38□□□□□ -0.43
EPHB3-201ENST00000330394 C5orf66Q9H5L9 145 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 ZNF107Q9UII5 783 aaPredicted RBP12.38□□□□□ -0.43
EPHB3-201ENST00000330394 ZNF732B4DXR9 585 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 ADAM11O75078 769 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 BGLAPP02818 100 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 SLC25A6P12236 298 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 SPINK9Q5DT21 86 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 FAM78BQ5VT40 261 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 BTNL8Q6UX41 500 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 Q6ZS52 159 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 SURF2Q15527 256 aaPredicted RBP12.38□□□□□ -0.43
EPHB3-201ENST00000330394 ACER2Q5QJU3 275 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 SPATA46Q5T0L3 261 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 RNF133Q8WVZ7 376 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 VAMP8Q9BV40 100 aa12.38□□□□□ -0.43
EPHB3-201ENST00000330394 GGACTQ9BVM4 153 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms