RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 PPP1CBP62140 327 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 TUSC1Q2TAM9 212 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 C17orf107Q6ZR85 190 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 ZNF546Q86UE3 836 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 SLC25A42Q86VD7 318 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 C17orf78Q8N4C9 275 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 SPERTQ8NA61 448 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 PXT1Q8NFP0 134 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 MRGPRFQ96AM1 343 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 Q96M66 194 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 IGF2RP11717 2491 aa17.38■□□□□ 0.37
RIPPLY3-201ENST00000329553 OR5H14A6NHG9 310 aa17.38■□□□□ 0.37
RIPPLY3-201ENST00000329553 KRBOX1C9JBD0 128 aa17.38■□□□□ 0.37
RIPPLY3-201ENST00000329553 J3QW42 95 aa17.38■□□□□ 0.37
RIPPLY3-201ENST00000329553 HLA-GP17693 338 aa17.38■□□□□ 0.37
RIPPLY3-201ENST00000329553 ZBTB25P24278 435 aa17.38■□□□□ 0.37
RIPPLY3-201ENST00000329553 NUP62P37198 522 aaPredicted RBP17.38■□□□□ 0.37
RIPPLY3-201ENST00000329553 GPM6AP51674 278 aa17.38■□□□□ 0.37
RIPPLY3-201ENST00000329553 UCP2P55851 309 aa17.38■□□□□ 0.37
RIPPLY3-201ENST00000329553 ERVS71-1P61550 626 aa17.38■□□□□ 0.37
RIPPLY3-201ENST00000329553 RNASE10Q5GAN6 216 aaKnown RBP17.38■□□□□ 0.37
RIPPLY3-201ENST00000329553 GFRALQ6UXV0 394 aa17.38■□□□□ 0.37
RIPPLY3-201ENST00000329553 PDZD9Q8IXQ8 264 aa17.38■□□□□ 0.37
RIPPLY3-201ENST00000329553 OR51F2Q8NH61 342 aa17.38■□□□□ 0.37
RIPPLY3-201ENST00000329553 OR2J1Q9GZK6 312 aa17.38■□□□□ 0.37
RIPPLY3-201ENST00000329553 ASF1BQ9NVP2 202 aa17.38■□□□□ 0.37
RIPPLY3-201ENST00000329553 COQ3Q9NZJ6 369 aa17.38■□□□□ 0.37
RIPPLY3-201ENST00000329553 A0A0D9SG52 128 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 OR5H1A6NKK0 313 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 PRRG2O14669 202 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 HLA-AP01891 365 aaKnown RBP17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 SFTPBP07988 381 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 TAGLNQ01995 201 aaKnown RBP17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 NKPD1Q17RQ9 610 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 FBXW12Q6X9E4 464 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 HSD17B13Q7Z5P4 300 aaPredicted RBP17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 EIF4E3Q8N5X7 224 aaKnown RBP17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 ANKRD30BLA7E2S9 258 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 SPDEFO95238 335 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 RLN2P04090 185 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 CSN2P05814 226 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 SLC25A4P12235 298 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 GABRR1P24046 479 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 PNLIPRP3Q17RR3 467 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 OR52W1Q6IF63 320 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 ZNF611Q8N823 705 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 ZDHHC22Q8N966 263 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 BVESQ8NE79 360 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 SFXN3Q9BWM7 321 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 PECRQ9BY49 303 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 SHARPINQ9H0F6 387 aa17.37■□□□□ 0.37
RIPPLY3-201ENST00000329553 ZNF732B4DXR9 585 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 ZNF345Q14585 488 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 TAF9Q16594 264 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 SLC25A26Q70HW3 274 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 LYG2Q86SG7 212 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 OBP2BQ9NPH6 170 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 IL36GQ9NZH8 169 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 NOP16Q9Y3C1 178 aaKnown RBP17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 CECR9P0C854 216 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 UBA52P62987 128 aaKnown RBP17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 LIN54Q6MZP7 749 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 KCNRGQ8N5I3 272 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 OR5A2Q8NGI9 324 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 OR1J1Q8NGS3 322 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 SLC25A40Q8TBP6 338 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 OR5P3Q8WZ94 311 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 SLC25A32Q9H2D1 315 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 IFT46Q9NQC8 304 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 ZNF581Q9P0T4 197 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 TINAGQ9UJW2 476 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 TNFSF18Q9UNG2 199 aa17.36■□□□□ 0.37
RIPPLY3-201ENST00000329553 BET1O15155 118 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 IGLV1-44P01699 117 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 HAAOP46952 286 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 C11orf87Q6NUJ2 197 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 ZSCAN4Q8NAM6 433 aaPredicted RBP17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 ST8SIA2Q92186 375 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 ST8SIA4Q92187 359 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 HIST1H2AAQ96QV6 131 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 MPC1Q9Y5U8 109 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 SLC25A15Q9Y619 301 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 RP1L1Q8IWN7 2480 aaPredicted RBP17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 NPBWR2P48146 333 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 PPP1R1AQ13522 171 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 ARFRP1Q13795 201 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 PIGYQ3MUY2 71 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 FAHD2BQ6P2I3 314 aaPredicted RBP17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 C6orf201Q7Z4U5 140 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 FBXL14Q8N1E6 418 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 OSR2Q8N2R0 312 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 MITD1Q8WV92 249 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 FAHD2AQ96GK7 314 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 ZNF835Q9Y2P0 537 aa17.35■□□□□ 0.37
RIPPLY3-201ENST00000329553 C9orf170A2RU37 121 aa17.34■□□□□ 0.37
RIPPLY3-201ENST00000329553 C1QTNF9BB2RNN3 333 aa17.34■□□□□ 0.37
RIPPLY3-201ENST00000329553 OR2F2O95006 317 aa17.34■□□□□ 0.37
RIPPLY3-201ENST00000329553 C1QTNF9P0C862 333 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms