RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 CEACAM6P40199 344 aa10.04□□□□□ -0.8
COL4A5-201ENST00000328300 TMEM30BQ3MIR4 351 aa10.04□□□□□ -0.8
COL4A5-201ENST00000328300 SLC25A47Q6Q0C1 308 aa10.04□□□□□ -0.8
COL4A5-201ENST00000328300 ST8SIA2Q92186 375 aa10.04□□□□□ -0.8
COL4A5-201ENST00000328300 RNF2Q99496 336 aa10.04□□□□□ -0.8
COL4A5-201ENST00000328300 NPTNQ9Y639 398 aa10.04□□□□□ -0.8
COL4A5-201ENST00000328300 DUS4LO95620 317 aaKnown RBP10.04□□□□□ -0.8
COL4A5-201ENST00000328300 CT45A10P0DMU9 189 aa10.04□□□□□ -0.8
COL4A5-201ENST00000328300 OR13C7P0DN81 318 aa10.04□□□□□ -0.8
COL4A5-201ENST00000328300 ZBTB44Q8NCP5 570 aa10.04□□□□□ -0.8
COL4A5-201ENST00000328300 DUSP18Q8NEJ0 188 aa10.04□□□□□ -0.8
COL4A5-201ENST00000328300 ERGIC1Q969X5 290 aa10.04□□□□□ -0.8
COL4A5-201ENST00000328300 MRPS18CQ9Y3D5 142 aaKnown RBP10.04□□□□□ -0.8
COL4A5-201ENST00000328300 FAM221AA4D161 298 aa10.04□□□□□ -0.8
COL4A5-201ENST00000328300 ADIRFQ15847 76 aa10.04□□□□□ -0.8
COL4A5-201ENST00000328300 THNSL2Q86YJ6 484 aa10.04□□□□□ -0.8
COL4A5-201ENST00000328300 OR4S2Q8NH73 311 aa10.04□□□□□ -0.8
COL4A5-201ENST00000328300 SFXN3Q9BWM7 321 aa10.04□□□□□ -0.8
COL4A5-201ENST00000328300 THYN1Q9P016 225 aa10.04□□□□□ -0.8
COL4A5-201ENST00000328300 CLEC18AA5D8T8 446 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 C11orf87Q6NUJ2 197 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 SKA3Q8IX90 412 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 CLEC18CQ8NCF0 446 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 FBLIM1Q8WUP2 373 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 SPSB2Q99619 263 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 GAB2Q9UQC2 676 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 F5P12259 2224 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 PATJQ8NI35 1801 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 XKRY2A2RUG3 117 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 BRS3P32247 399 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 FAM162BQ5T6X4 162 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 SFT2D1Q8WV19 159 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 TMEM45BQ96B21 275 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 VWCEQ96DN2 955 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 KCNK17Q96T54 332 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 C20orf24Q9BUV8 137 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 HEXA-AS1Q9H8Q6 139 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 ZNF71Q9NQZ8 489 aaPredicted RBP10.03□□□□□ -0.8
COL4A5-201ENST00000328300 RCL1Q9Y2P8 373 aaKnown RBP10.03□□□□□ -0.8
COL4A5-201ENST00000328300 C3orf85A0A1B0GTC6 90 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 A0A1W2PN81 502 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 PPIHO43447 177 aaKnown RBP10.03□□□□□ -0.8
COL4A5-201ENST00000328300 CHRNA7P36544 502 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 FUT5Q11128 374 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 C1QTNF12Q5T7M4 302 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 FAM219BQ5XKK7 198 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 HES4Q9HCC6 221 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 MASP2O00187 686 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 GNB1P62873 340 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 MGAT2Q10469 447 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 LYPD8Q6UX82 237 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 ANXA10Q9UJ72 324 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 IGKV3D-11A0A0A0MRZ8 115 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 HAND1O96004 215 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 ISG15P05161 165 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 PGA4P0DJD7 388 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 OR4A4PQ8NGN8 299 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 BSCL2Q96G97 398 aaPredicted RBP10.03□□□□□ -0.8
COL4A5-201ENST00000328300 PTDSS2Q9BVG9 487 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 LINC00470Q9BZP3 86 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 TINAGL1Q9GZM7 467 aaPredicted RBP10.03□□□□□ -0.8
COL4A5-201ENST00000328300 URGCP-MRPS24S4R325 110 aa10.03□□□□□ -0.8
COL4A5-201ENST00000328300 PYCARD-AS1I3L0S3 204 aa10.02□□□□□ -0.8
COL4A5-201ENST00000328300 CTSSP25774 331 aa10.02□□□□□ -0.8
COL4A5-201ENST00000328300 HIF1ANQ9NWT6 349 aa10.02□□□□□ -0.8
COL4A5-201ENST00000328300 C1RLQ9NZP8 487 aa10.02□□□□□ -0.8
COL4A5-201ENST00000328300 ST6GALNAC2Q9UJ37 374 aa10.02□□□□□ -0.8
COL4A5-201ENST00000328300 MPZL1O95297 269 aa10.02□□□□□ -0.8
COL4A5-201ENST00000328300 CST4P01036 141 aa10.02□□□□□ -0.8
COL4A5-201ENST00000328300 NRN1LQ496H8 165 aa10.02□□□□□ -0.8
COL4A5-201ENST00000328300 C17orf107Q6ZR85 190 aa10.02□□□□□ -0.8
COL4A5-201ENST00000328300 MOB3BQ86TA1 216 aa10.02□□□□□ -0.8
COL4A5-201ENST00000328300 ABHD3Q8WU67 409 aa10.02□□□□□ -0.8
COL4A5-201ENST00000328300 ORAI1Q96D31 301 aa10.02□□□□□ -0.8
COL4A5-201ENST00000328300 MGST1P10620 155 aaKnown RBP10.02□□□□□ -0.81
COL4A5-201ENST00000328300 IL34Q6ZMJ4 242 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 TMEM182Q6ZP80 229 aaPredicted RBP10.02□□□□□ -0.81
COL4A5-201ENST00000328300 BATF2Q8N1L9 274 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 TCTEX1D1Q8N7M0 179 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 SAP30LQ9HAJ7 183 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 GNB4Q9HAV0 340 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 ELOVL5Q9NYP7 299 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 GPANK1O95872 356 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 S100A8P05109 93 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 GABRA4P48169 554 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 GUCA2AQ02747 115 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 TESK1Q15569 626 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 ETFDHQ16134 617 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 UQCC3Q6UW78 93 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 PHYHIPLQ96FC7 376 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 MARVELD1Q9BSK0 173 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 ONECUT1Q9UBC0 465 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 GFRA3O60609 400 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 EXOSC2Q13868 293 aaKnown RBP10.02□□□□□ -0.81
COL4A5-201ENST00000328300 TOR2AQ5JU69 321 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 SAXO1Q8IYX7 474 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 C10orf111Q8N326 155 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 ZNF519Q8TB69 540 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 PPP1R1CQ8WVI7 109 aa10.02□□□□□ -0.81
COL4A5-201ENST00000328300 ERRFI1Q9UJM3 462 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms