RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 A0A0G2JMM0 328 aa11.21□□□□□ -0.61
HMGCS1-201ENST00000325110 A0A1W2PPB8 328 aa11.21□□□□□ -0.61
HMGCS1-201ENST00000325110 A0A1W2PRS3 328 aa11.21□□□□□ -0.61
HMGCS1-201ENST00000325110 PMS2P1A4D2B8 440 aa11.21□□□□□ -0.61
HMGCS1-201ENST00000325110 KIR3DP1A8MWS1 328 aa11.21□□□□□ -0.61
HMGCS1-201ENST00000325110 RD3LP0DJH9 198 aa11.21□□□□□ -0.61
HMGCS1-201ENST00000325110 AADACP22760 399 aa11.21□□□□□ -0.61
HMGCS1-201ENST00000325110 SULT1A2P50226 295 aa11.21□□□□□ -0.61
HMGCS1-201ENST00000325110 DVL1P1P54792 670 aaPredicted RBP11.21□□□□□ -0.61
HMGCS1-201ENST00000325110 RTL6Q6ICC9 239 aa11.21□□□□□ -0.61
HMGCS1-201ENST00000325110 SFT2D1Q8WV19 159 aa11.21□□□□□ -0.61
HMGCS1-201ENST00000325110 SMOC1Q9H4F8 434 aa11.21□□□□□ -0.61
HMGCS1-201ENST00000325110 KIAA2026Q5HYC2 2103 aa11.21□□□□□ -0.61
HMGCS1-201ENST00000325110 A0A0U1RQV5 110 aa11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 NAT2P11245 290 aa11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 TCN2P20062 427 aa11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 PCOLCEQ15113 449 aa11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 OR2G3Q8NGZ4 309 aa11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 LIME1Q9H400 295 aa11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 CALHM2Q9HA72 323 aa11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 RPS2P15880 293 aaKnown RBP11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 ZNF92Q03936 586 aa11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 FAM89BQ8N5H3 189 aa11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 ZNF611Q8N823 705 aa11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 CCDC71LQ8N9Z2 235 aa11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 OR51H1Q8NH63 302 aa11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 GLYATL2Q8WU03 294 aa11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 NAT6Q93015 286 aa11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 SPSB1Q96BD6 273 aa11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 NUDT16L1Q9BRJ7 211 aaKnown RBP11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 KPTNQ9Y664 436 aa11.21□□□□□ -0.62
HMGCS1-201ENST00000325110 A0A1W2PPE2 198 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 CRYM-AS1A6NIL9 109 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 NUDT19A8MXV4 375 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 C3orf80F5H4A9 247 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 HAAOP46952 286 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 DHRS7BQ6IAN0 325 aaPredicted RBP11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 DNASE2BQ8WZ79 361 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 PLEKHA2Q9HB19 425 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 TMEM100Q9NV29 134 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 PISDQ9UG56 409 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 HS3ST3B1Q9Y662 390 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 NPBWR2P48146 333 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 RAB35Q15286 201 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 SURF2Q15527 256 aaPredicted RBP11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 SLC35G3Q8N808 338 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 SUMF2Q8NBJ7 301 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 ADPRHL1Q8NDY3 354 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 RDH5Q92781 318 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 HIST1H2AAQ96QV6 131 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 ESRP2Q9H6T0 727 aaKnown RBP11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 C19orf12Q9NSK7 152 aa11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 CARHSP1Q9Y2V2 147 aaKnown RBP11.2□□□□□ -0.62
HMGCS1-201ENST00000325110 IGKV1-27A0A075B6S5 117 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 C7orf77A4D0Y5 90 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 GJE1A6NN92 205 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 ZIC3O60481 467 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 CBR3O75828 277 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 CCL1P22362 96 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 PPP1CCP36873 323 aaKnown RBP11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 NKX2-1P43699 371 aaPredicted RBP11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 RPS10P46783 165 aaKnown RBP11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 RAC1P63000 192 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 HGFACQ04756 655 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 SPEM2Q0P670 501 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 EIF2S3LQ2VIR3 472 aaKnown RBP11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 SLC25A53Q5H9E4 307 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 SOHLH1Q5JUK2 328 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 MRPL21Q7Z2W9 205 aaKnown RBP11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 OR10D3Q8NH80 312 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 PBDC1Q9BVG4 233 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 PCED1AQ9H1Q7 454 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 MMP24Q9Y5R2 645 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 CNOT1A5YKK6 2376 aaKnown RBP11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 NKX2-6A6NCS4 301 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 HS3ST1O14792 307 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 HSPA12AO43301 675 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 CNOT4O95628 575 aaKnown RBP11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 HLA-HP01893 362 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 TK1P04183 234 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 NQO2P16083 231 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 GPM6AP51674 278 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 PSG4Q00888 419 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 RSPO1Q2MKA7 263 aaPredicted RBP11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 SMIM8Q96KF7 97 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 NIT2Q9NQR4 276 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 ATPIF1Q9UII2 106 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 CACNA1GO43497 2377 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 EP300Q09472 2414 aaPredicted RBP11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 MRPL33O75394 65 aaKnown RBP11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 RFPL3SP0C7P2 107 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 ECI1P42126 302 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 CLDN15P56746 228 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 TLE1Q04724 770 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 EXT1Q16394 746 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 OR56B2PQ8NGI1 322 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 NABP1Q96AH0 204 aa11.19□□□□□ -0.62
HMGCS1-201ENST00000325110 C5orf49A4QMS7 147 aa11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 MRPS34P82930 218 aaKnown RBP11.18□□□□□ -0.62
HMGCS1-201ENST00000325110 TSC22D1Q15714 1073 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms