RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 KLHL24Q6TFL4 600 aa9.06□□□□□ -0.96
SF3B2-201ENST00000322535 TMEM182Q6ZP80 229 aaPredicted RBP9.06□□□□□ -0.96
SF3B2-201ENST00000322535 DNM1P46Q6ZS02 220 aa9.06□□□□□ -0.96
SF3B2-201ENST00000322535 ZNF550Q7Z398 422 aa9.06□□□□□ -0.96
SF3B2-201ENST00000322535 ATG4DQ86TL0 474 aaPredicted RBP9.06□□□□□ -0.96
SF3B2-201ENST00000322535 SAXO1Q8IYX7 474 aa9.06□□□□□ -0.96
SF3B2-201ENST00000322535 OR2L13Q8N349 312 aa9.06□□□□□ -0.96
SF3B2-201ENST00000322535 FAM222BQ8WU58 562 aa9.06□□□□□ -0.96
SF3B2-201ENST00000322535 CACNG8Q8WXS5 425 aa9.06□□□□□ -0.96
SF3B2-201ENST00000322535 HIST1H2AAQ96QV6 131 aa9.06□□□□□ -0.96
SF3B2-201ENST00000322535 MRPL13Q9BYD1 178 aaKnown RBP9.06□□□□□ -0.96
SF3B2-201ENST00000322535 ZNF552Q9H707 407 aaPredicted RBP9.06□□□□□ -0.96
SF3B2-201ENST00000322535 CGGBP1Q9UFW8 167 aaPredicted RBP9.06□□□□□ -0.96
SF3B2-201ENST00000322535 A0A1W2PNV4 684 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 A0A1W2PR77 199 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 DCDC2BA2VCK2 349 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 TNFRSF10CO14798 259 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 BRI3O95415 125 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 DUS4LO95620 317 aaKnown RBP9.05□□□□□ -0.96
SF3B2-201ENST00000322535 GLB1P16278 677 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 HIST1H1CP16403 213 aaKnown RBP9.05□□□□□ -0.96
SF3B2-201ENST00000322535 CMPK1P30085 196 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 SLC35A1P78382 337 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 RBPJQ06330 500 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 RAB11BQ15907 218 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 ZNF260Q3ZCT1 412 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 WDR25Q64LD2 544 aaPredicted RBP9.05□□□□□ -0.96
SF3B2-201ENST00000322535 BHLHA15Q7RTS1 189 aaPredicted RBP9.05□□□□□ -0.96
SF3B2-201ENST00000322535 CCDC74AQ96AQ1 378 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 CMKLR1Q99788 373 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 NMES1Q9C002 83 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 VAX2Q9UIW0 290 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 ST3GAL6Q9Y274 331 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 TRAV39A0A0B4J263 110 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 IGHV2OR16-5A0A0B4J2B6 119 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 SLC2A5P22732 501 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 OR10J1P30954 320 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 CX3CR1P49238 355 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 PRR27Q6MZM9 219 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 FIGLAQ6QHK4 219 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 VN1R4Q7Z5H5 301 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 CSNK1A1LQ8N752 337 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 TMEM37Q8WXS4 190 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 MRGPRFQ96AM1 343 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 CTHRC1Q96CG8 243 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 WDR34Q96EX3 536 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 AQP10Q96PS8 301 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 NMNAT3Q96T66 252 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 C20orf144Q9BQM9 153 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 FOXD3Q9UJU5 478 aaPredicted RBP9.05□□□□□ -0.96
SF3B2-201ENST00000322535 KNTC1P50748 2209 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 ADAMTS9Q9P2N4 1935 aa9.05□□□□□ -0.96
SF3B2-201ENST00000322535 TRBV6-7A0A0A0MS04 114 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 NPIPA5A0A0B4J1W7 369 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 CENPVL1A0A0U1RR11 272 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 G3V3Y1 287 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 CFIP05156 583 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 PF4V1P10720 104 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 OR3A2P47893 321 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 FOXL2P58012 376 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 SQSTM1Q13501 440 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 FCRL6Q6DN72 434 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 TRAPPC6BQ86SZ2 158 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 SYS1Q8N2H4 156 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 CYB561D1Q8N8Q1 229 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 FLVCR1-AS1Q8TAF5 88 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 DNASE2BQ8WZ79 361 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 FAM46BQ96A09 425 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 CLDN23Q96B33 292 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 MS4A6EQ96DS6 147 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 TSSK2Q96PF2 358 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 ALG12Q9BV10 488 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 IER3IP1Q9Y5U9 82 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 A0A0A6YYH2 397 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 A0A1B0GU03 582 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 A6NJ64 397 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 C4orf47A7E2U8 309 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 C9orf172C9J069 976 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 K7ERU9 68 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 TNFSF13O75888 250 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 CTSDP07339 412 aaPredicted RBP9.04□□□□□ -0.96
SF3B2-201ENST00000322535 OR1D5P58170 312 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 ARF6P62330 175 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 DUSP2Q05923 314 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 RUNX2Q13950 521 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 TMEM241Q24JQ0 296 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 FAM220AQ7Z4H9 259 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 TMEM186Q96B77 213 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 NIPSNAP3BQ9BS92 247 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 AHSPQ9NZD4 102 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 FLRT3Q9NZU0 649 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 FRRS1LQ9P0K9 344 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 LIPGQ9Y5X9 500 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 HEBP2Q9Y5Z4 205 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 ZFHX2Q9C0A1 2572 aaPredicted RBP9.04□□□□□ -0.96
SF3B2-201ENST00000322535 A0A1B0GV72 72 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 JTBO76095 146 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 PPIAL4GP0DN37 164 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 ZXDAP98168 799 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 ZNF66Q6ZN08 573 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms