RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 HGDQ93099 445 aa8.75□□□□□ -1.01
COL12A1-201ENST00000322507 ZNF714Q96N38 554 aa8.75□□□□□ -1.01
COL12A1-201ENST00000322507 TIMM9Q9Y5J7 89 aa8.75□□□□□ -1.01
COL12A1-201ENST00000322507 ZNF729A6NN14 1252 aaPredicted RBP8.75□□□□□ -1.01
COL12A1-201ENST00000322507 PF4V1P10720 104 aa8.75□□□□□ -1.01
COL12A1-201ENST00000322507 PFN3P60673 137 aa8.75□□□□□ -1.01
COL12A1-201ENST00000322507 TCF23Q7RTU1 214 aa8.75□□□□□ -1.01
COL12A1-201ENST00000322507 Q8WTZ3 238 aa8.75□□□□□ -1.01
COL12A1-201ENST00000322507 SNRPBP14678 240 aaKnown RBP8.74□□□□□ -1.01
COL12A1-201ENST00000322507 CCR5P51681 352 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 WNT3P56703 355 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 OR10G3Q8NGC4 313 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 ASB10Q8WXI3 467 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 ELSPBP1Q96BH3 223 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 TAAR6Q96RI8 345 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 SLC45A2Q9UMX9 530 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 KIR2DS2P43631 304 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 PPP1CAP62136 330 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 DEFB133Q30KQ1 61 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 ZNF542PQ5EBM4 170 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 NKAIN2Q5VXU1 208 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 CYB5R2Q6BCY4 276 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 MORN3Q6PF18 240 aaPredicted RBP8.74□□□□□ -1.01
COL12A1-201ENST00000322507 ZBP1Q9H171 429 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 S1PR5Q9H228 398 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 SLC5A6Q9Y289 635 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 KLF13Q9Y2Y9 288 aaPredicted RBP8.74□□□□□ -1.01
COL12A1-201ENST00000322507 NPTNQ9Y639 398 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 TMEM8BA6NDV4 472 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 DUS4LO95620 317 aaKnown RBP8.74□□□□□ -1.01
COL12A1-201ENST00000322507 CLDN18P56856 261 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 NEIL1Q96FI4 390 aaPredicted RBP8.74□□□□□ -1.01
COL12A1-201ENST00000322507 ATRXP46100 2492 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 SPTAN1Q13813 2472 aaKnown RBP8.74□□□□□ -1.01
COL12A1-201ENST00000322507 ZBTB42B2RXF5 422 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 COX7A2P2O60397 106 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 ZNF737O75373 536 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 TNFSF15O95150 251 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 GAMTQ14353 236 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 MAP1LC3AQ9H492 121 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 GSN-AS1Q9NRJ2 163 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 NOTCH3Q9UM47 2321 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 FAM78BQ5VT40 261 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 SYT9Q86SS6 491 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 ASB5Q8WWX0 329 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 MRGPRX1Q96LB2 322 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 GPR137Q96N19 417 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 THAP10Q9P2Z0 257 aaPredicted RBP8.74□□□□□ -1.01
COL12A1-201ENST00000322507 MARF1Q9Y4F3 1742 aaKnown RBP8.74□□□□□ -1.01
COL12A1-201ENST00000322507 TRAV8-4A0A0B4J246 113 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 OR51S1Q8NGJ8 323 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 HHIPQ96QV1 700 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 TMEM147Q9BVK8 224 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 TXNIPQ9H3M7 391 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 CLEC2LP0C7M8 214 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 TNFRSF13CQ96RJ3 184 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 PISDQ9UG56 409 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 FIGNL2A6NMB9 653 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 LIM2P55344 173 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 MRM1Q6IN84 353 aaKnown RBP8.74□□□□□ -1.01
COL12A1-201ENST00000322507 ZNF346Q9UL40 294 aaKnown RBP8.74□□□□□ -1.01
COL12A1-201ENST00000322507 ACOT8O14734 319 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 EIF3IQ13347 325 aaKnown RBP8.74□□□□□ -1.01
COL12A1-201ENST00000322507 OR1P1Q8NH06 330 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 C1orf43Q9BWL3 253 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 CXorf36Q9H7Y0 433 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 FGF21Q9NSA1 209 aa8.74□□□□□ -1.01
COL12A1-201ENST00000322507 AKIP1Q9NQ31 210 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 R4GMQ9 66 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 MPZL1O95297 269 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 HLA-DRB1P01911 266 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 ARIH2OSQ8N7S6 290 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 PARLQ9H300 379 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 ANKRD61A6NGH8 418 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 EIF3GO75821 320 aaKnown RBP eCLIP8.73□□□□□ -1.01
COL12A1-201ENST00000322507 OR10G8Q8NGN5 311 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 OR10X1Q8NGY0 326 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 SARAFQ96BY9 339 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 ZNF253O75346 499 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 FAM78AQ5JUQ0 283 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 TTC9BQ8N6N2 239 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 FLVCR1Q9Y5Y0 555 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 IFITM5A6NNB3 132 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 ESDP10768 282 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 IGFBP7Q16270 282 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 PDCD11Q14690 1871 aaKnown RBP8.73□□□□□ -1.01
COL12A1-201ENST00000322507 A0A1W2PPC4 97 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 MLF2Q15773 248 aaPredicted RBP8.73□□□□□ -1.01
COL12A1-201ENST00000322507 INSM2Q96T92 566 aaPredicted RBP8.73□□□□□ -1.01
COL12A1-201ENST00000322507 PRSS21Q9Y6M0 314 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 NPPBP16860 134 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 HOXA6P31267 233 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 CLDN15P56746 228 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 ISL1P61371 349 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 SNRPNP63162 240 aaKnown RBP8.73□□□□□ -1.01
COL12A1-201ENST00000322507 ZXDAP98168 799 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 CDKN3Q16667 212 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 SNAI3Q3KNW1 292 aa8.73□□□□□ -1.01
COL12A1-201ENST00000322507 ZNF770Q6IQ21 691 aaPredicted RBP8.73□□□□□ -1.01
COL12A1-201ENST00000322507 PPP1R1CQ8WVI7 109 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms