RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ZNF319Q9P2F9 582 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 ZNF107Q9UII5 783 aaPredicted RBP11.37□□□□□ -0.59
CPNE1-201ENST00000317677 POLR1DQ9Y2S0 133 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 ZNF878C9JN71 531 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 E9PLN8 166 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 IL2RAP01589 272 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 ZNF708P17019 499 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 PSMB6P28072 239 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.37□□□□□ -0.59
CPNE1-201ENST00000317677 FAM24BQ8N5W8 94 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 ZFP62Q8NB50 900 aaPredicted RBP11.37□□□□□ -0.59
CPNE1-201ENST00000317677 TMEM229BQ8NBD8 167 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 OR10D4PQ8NGN7 298 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 OR2AJ1Q8NGZ0 328 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 PBOV1Q9GZY1 135 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 NELFAQ9H3P2 528 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 TAS2R4Q9NYW5 299 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 DOK5Q9P104 306 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 B4GALT7Q9UBV7 327 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 DHDHQ9UQ10 334 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 KLF13Q9Y2Y9 288 aaPredicted RBP11.37□□□□□ -0.59
CPNE1-201ENST00000317677 PTPRQQ9UMZ3 2332 aa11.37□□□□□ -0.59
CPNE1-201ENST00000317677 DNAJC13O75165 2243 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 ITPR1Q14643 2758 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 PGAM2P15259 253 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 MSR1P21757 451 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 CFPP27918 469 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 CD80P33681 288 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 HIST1H3AP68431 136 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 PLGLB1Q02325 96 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 SRYQ05066 204 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 CLN3Q13286 438 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 OR8G1Q15617 311 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 C3AR1Q16581 482 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 RSPO1Q2MKA7 263 aaPredicted RBP11.36□□□□□ -0.59
CPNE1-201ENST00000317677 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.36□□□□□ -0.59
CPNE1-201ENST00000317677 CCDC54Q8NEL0 328 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 OR51A2Q8NGJ7 313 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 HAS2Q92819 552 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 FOXRED1Q96CU9 486 aaPredicted RBP11.36□□□□□ -0.59
CPNE1-201ENST00000317677 AKR1E2Q96JD6 320 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 RBM24Q9BX46 236 aaKnown RBP11.36□□□□□ -0.59
CPNE1-201ENST00000317677 ULBP2Q9BZM5 246 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 SELENOIQ9C0D9 397 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 SLITRK2Q9H156 845 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 HHLA2Q9UM44 414 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 CACNA1GO43497 2377 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 ZNF724A8MTY0 619 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 PTBP3O95758 552 aaKnown RBP11.36□□□□□ -0.59
CPNE1-201ENST00000317677 CD3DP04234 171 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 SNRNP70P08621 437 aaKnown RBP11.36□□□□□ -0.59
CPNE1-201ENST00000317677 CD37P11049 281 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 LYL1P12980 280 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 FSTP19883 344 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 ZBTB25P24278 435 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 UCP2P55851 309 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 TAS2R19P59542 299 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 ACTBP60709 375 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 ACTG1P63261 375 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 GAGE1Q13065 139 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 AKIRIN2Q53H80 203 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 FAM166AQ6J272 317 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 FAHD2BQ6P2I3 314 aaPredicted RBP11.36□□□□□ -0.59
CPNE1-201ENST00000317677 CLEC9AQ6UXN8 241 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 SPNS3Q6ZMD2 512 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 BIVMQ86UB2 503 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 CD163Q86VB7 1156 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 LRRC18Q8N456 261 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 PRR18Q8N4B5 295 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 FDCSPQ8NFU4 85 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 MITD1Q8WV92 249 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 ISOC2Q96AB3 205 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 GALNT14Q96FL9 552 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 FAHD2AQ96GK7 314 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 SEC22AQ96IW7 307 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 KCNK15Q9H427 330 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 RGCCQ9H4X1 137 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 FN3KRPQ9HA64 309 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 STARD10Q9Y365 291 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 RHBDD3Q9Y3P4 386 aa11.36□□□□□ -0.59
CPNE1-201ENST00000317677 LAMA5O15230 3695 aa11.35□□□□□ -0.59
CPNE1-201ENST00000317677 H7C1Q1 480 aa11.35□□□□□ -0.59
CPNE1-201ENST00000317677 NR2C1P13056 603 aa11.35□□□□□ -0.59
CPNE1-201ENST00000317677 PRSS3P35030 304 aa11.35□□□□□ -0.59
CPNE1-201ENST00000317677 AKR1C3P42330 323 aa11.35□□□□□ -0.59
CPNE1-201ENST00000317677 SULT1A1P50225 295 aa11.35□□□□□ -0.59
CPNE1-201ENST00000317677 SULT1A2P50226 295 aa11.35□□□□□ -0.59
CPNE1-201ENST00000317677 CCL11P51671 97 aa11.35□□□□□ -0.59
CPNE1-201ENST00000317677 RRADP55042 308 aa11.35□□□□□ -0.59
CPNE1-201ENST00000317677 ZNF121P58317 390 aaPredicted RBP11.35□□□□□ -0.59
CPNE1-201ENST00000317677 CYCSP99999 105 aaKnown RBP11.35□□□□□ -0.59
CPNE1-201ENST00000317677 ATXN7L3Q14CW9 347 aaPredicted RBP11.35□□□□□ -0.59
CPNE1-201ENST00000317677 ZNF766Q5HY98 468 aa11.35□□□□□ -0.59
CPNE1-201ENST00000317677 KLHL24Q6TFL4 600 aa11.35□□□□□ -0.59
CPNE1-201ENST00000317677 AAED1Q7RTV5 226 aa11.35□□□□□ -0.59
CPNE1-201ENST00000317677 SLC25A42Q86VD7 318 aa11.35□□□□□ -0.59
CPNE1-201ENST00000317677 LYPD6Q86Y78 171 aa11.35□□□□□ -0.59
CPNE1-201ENST00000317677 GABRG1Q8N1C3 465 aa11.35□□□□□ -0.59
CPNE1-201ENST00000317677 OR8B12Q8NGG6 310 aa11.35□□□□□ -0.59
CPNE1-201ENST00000317677 OR13C3Q8NGS6 347 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms