RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 MAFIPQ8WZ33 124 aa11.96□□□□□ -0.49
VAMP2-201ENST00000316509 SEC22AQ96IW7 307 aa11.96□□□□□ -0.49
VAMP2-201ENST00000316509 ZNF442Q9H7R0 627 aa11.96□□□□□ -0.49
VAMP2-201ENST00000316509 CDH20Q9HBT6 801 aa11.96□□□□□ -0.49
VAMP2-201ENST00000316509 MEMO1Q9Y316 297 aa11.96□□□□□ -0.49
VAMP2-201ENST00000316509 KANTRA0A1W2PQU2 76 aa11.96□□□□□ -0.5
VAMP2-201ENST00000316509 FAM25EA8MYX2 175 aa11.96□□□□□ -0.5
VAMP2-201ENST00000316509 CBR1P16152 277 aa11.96□□□□□ -0.5
VAMP2-201ENST00000316509 GLP1RP43220 463 aa11.96□□□□□ -0.5
VAMP2-201ENST00000316509 NOVA1P51513 510 aaKnown RBP11.96□□□□□ -0.5
VAMP2-201ENST00000316509 GPM6AP51674 278 aa11.96□□□□□ -0.5
VAMP2-201ENST00000316509 GABRA6Q16445 453 aa11.96□□□□□ -0.5
VAMP2-201ENST00000316509 C1orf174Q8IYL3 243 aa11.96□□□□□ -0.5
VAMP2-201ENST00000316509 INO80EQ8NBZ0 244 aaPredicted RBP11.96□□□□□ -0.5
VAMP2-201ENST00000316509 TNRC6AQ8NDV7 1962 aaKnown RBP11.96□□□□□ -0.5
VAMP2-201ENST00000316509 C2orf50Q96LR7 162 aa11.96□□□□□ -0.5
VAMP2-201ENST00000316509 SYT3Q9BQG1 590 aa11.96□□□□□ -0.5
VAMP2-201ENST00000316509 HDHD3Q9BSH5 251 aaPredicted RBP11.96□□□□□ -0.5
VAMP2-201ENST00000316509 CHMP1AQ9HD42 196 aaPredicted RBP11.96□□□□□ -0.5
VAMP2-201ENST00000316509 OBP2BQ9NPH6 170 aa11.96□□□□□ -0.5
VAMP2-201ENST00000316509 SPEGQ15772 3267 aa11.96□□□□□ -0.5
VAMP2-201ENST00000316509 CCSO14618 274 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 OR7C1O76099 320 aaPredicted RBP11.95□□□□□ -0.5
VAMP2-201ENST00000316509 CTXN2P0C2S0 81 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 LYL1P12980 280 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 BCL3P20749 454 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 RBMXP38159 391 aaKnown RBP11.95□□□□□ -0.5
VAMP2-201ENST00000316509 NPBWR2P48146 333 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 ZNF169Q14929 603 aaPredicted RBP11.95□□□□□ -0.5
VAMP2-201ENST00000316509 C6orf183Q5T699 404 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 C17orf78Q8N4C9 275 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 MICU1Q9BPX6 476 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 FGF23Q9GZV9 251 aaPredicted RBP11.95□□□□□ -0.5
VAMP2-201ENST00000316509 IFT22Q9H7X7 185 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 PLSCR4Q9NRQ2 329 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 A0A1B0GW55 424 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 CRYM-AS1A6NIL9 109 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 EEF1E1-BLOC1S5C9J1V9 151 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 DUX4L2P0CJ85 424 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 DUX4L3P0CJ86 424 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 DUX4L4P0CJ87 422 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 DUX4L5P0CJ88 424 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 DUX4L6P0CJ89 424 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 DUX4L7P0CJ90 424 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 PET100P0DJ07 73 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 ZNF728P0DKX0 622 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 RAC2P15153 192 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 COX5AP20674 150 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 SLAMF9Q96A28 289 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 PHYHIPLQ96FC7 376 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 RTL8AQ9BWD3 113 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 MTCH1Q9NZJ7 389 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 DUX4Q9UBX2 424 aa11.95□□□□□ -0.5
VAMP2-201ENST00000316509 TRBV6-6A0A0A6YYG2 114 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 C13orf42A0A1B0GVH6 325 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 MSTNO14793 375 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 BCL2L11O43521 198 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 OPRM1P35372 400 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 RBM39Q14498 530 aaKnown RBP11.94□□□□□ -0.5
VAMP2-201ENST00000316509 SLC9A3R2Q15599 337 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 EIF2S3LQ2VIR3 472 aaKnown RBP11.94□□□□□ -0.5
VAMP2-201ENST00000316509 SLC22A25Q6T423 547 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 Q8IYB0 196 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 SLC38A6Q8IZM9 456 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 FAM185AQ8N0U4 392 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 ANGPTL6Q8NI99 470 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 EXTL1Q92935 676 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 GALNT14Q96FL9 552 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 METTL8Q9H825 291 aaKnown RBP11.94□□□□□ -0.5
VAMP2-201ENST00000316509 DMDP11532 3685 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 KIR2DS1A0A191URI9 304 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 ACAA1P09110 424 aaPredicted RBP11.94□□□□□ -0.5
VAMP2-201ENST00000316509 RRASP10301 218 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 HOXC12P31275 282 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 NUP62P37198 522 aaPredicted RBP11.94□□□□□ -0.5
VAMP2-201ENST00000316509 KIR2DL2P43627 348 aaPredicted RBP11.94□□□□□ -0.5
VAMP2-201ENST00000316509 KIR2DS4P43632 304 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 PPP1CBP62140 327 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 KIR2DS1Q14954 304 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 ANKRD55Q3KP44 614 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 FAM76BQ5HYJ3 339 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 FAM169BQ8N8A8 192 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 CCDC71LQ8N9Z2 235 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 MOB3AQ96BX8 217 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 CITED4Q96RK1 184 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 SUCNR1Q9BXA5 334 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 OR51I2Q9H344 312 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 DLL3Q9NYJ7 618 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 DNAJB11Q9UBS4 358 aa11.94□□□□□ -0.5
VAMP2-201ENST00000316509 TEX13DA0A0J9YY54 714 aaPredicted RBP11.93□□□□□ -0.5
VAMP2-201ENST00000316509 J3QT63 122 aa11.93□□□□□ -0.5
VAMP2-201ENST00000316509 SMPD2O60906 423 aa11.93□□□□□ -0.5
VAMP2-201ENST00000316509 NAPSAO96009 420 aa11.93□□□□□ -0.5
VAMP2-201ENST00000316509 IFNA21P01568 189 aa11.93□□□□□ -0.5
VAMP2-201ENST00000316509 PTGER4P35408 488 aa11.93□□□□□ -0.5
VAMP2-201ENST00000316509 BAMBIQ13145 260 aa11.93□□□□□ -0.5
VAMP2-201ENST00000316509 ACSF3Q4G176 576 aaPredicted RBP11.93□□□□□ -0.5
VAMP2-201ENST00000316509 ABCA11PQ4W5N1 156 aa11.93□□□□□ -0.5
VAMP2-201ENST00000316509 PRSS54Q6PEW0 395 aa11.93□□□□□ -0.5
VAMP2-201ENST00000316509 SLC25A32Q9H2D1 315 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms