RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 PMP2P02689 132 aa6.65□□□□□ -1.35
CNOT4-201ENST00000315544 SP1P08047 785 aa6.65□□□□□ -1.35
CNOT4-201ENST00000315544 SRSF1Q07955 248 aaKnown RBP eCLIP6.65□□□□□ -1.35
CNOT4-201ENST00000315544 ARL16Q0P5N6 197 aa6.65□□□□□ -1.35
CNOT4-201ENST00000315544 SCRN3Q0VDG4 424 aa6.65□□□□□ -1.35
CNOT4-201ENST00000315544 ICAM4Q14773 271 aa6.65□□□□□ -1.35
CNOT4-201ENST00000315544 HIKESHIQ53FT3 197 aa6.65□□□□□ -1.35
CNOT4-201ENST00000315544 GLIPR1L1Q6UWM5 242 aa6.65□□□□□ -1.35
CNOT4-201ENST00000315544 AGBL5Q8NDL9 886 aa6.65□□□□□ -1.35
CNOT4-201ENST00000315544 EMC6Q9BV81 110 aa6.65□□□□□ -1.35
CNOT4-201ENST00000315544 ARL6Q9H0F7 186 aa6.65□□□□□ -1.35
CNOT4-201ENST00000315544 RPS23P62266 143 aaKnown RBP6.64□□□□□ -1.35
CNOT4-201ENST00000315544 GRB2P62993 217 aaKnown RBP6.64□□□□□ -1.35
CNOT4-201ENST00000315544 TMEM176BQ3YBM2 270 aaPredicted RBP6.64□□□□□ -1.35
CNOT4-201ENST00000315544 TTLL10Q6ZVT0 673 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 LMX1AQ8TE12 382 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 AGMATQ9BSE5 352 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 CALHM2Q9HA72 323 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 TMEM242Q9NWH2 141 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 WIPI2Q9Y4P8 454 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 B4DGG1 531 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 CRTAPO75718 401 aaPredicted RBP6.64□□□□□ -1.35
CNOT4-201ENST00000315544 OR2J2O76002 312 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 IL32P24001 234 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 F2RL1P55085 397 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 OR7A5Q15622 319 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 ZNF575Q86XF7 245 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 MRPL30Q8TCC3 161 aaKnown RBP6.64□□□□□ -1.35
CNOT4-201ENST00000315544 ZDHHC12Q96GR4 267 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 IP6K3Q96PC2 410 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 SLITRK2Q9H156 845 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 Q9N2K0 584 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 MRPS33Q9Y291 106 aaKnown RBP6.64□□□□□ -1.35
CNOT4-201ENST00000315544 TTC28Q96AY4 2481 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 IGSF10Q6WRI0 2623 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 SSNA1O43805 119 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 SPDEFO95238 335 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 FCER2P06734 321 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 WNT5AP41221 380 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 PSG4Q00888 419 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 PLCXD2Q0VAA5 305 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 DPPA2Q7Z7J5 298 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 LINC00574Q9H8X3 128 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 CHMP1AQ9HD42 196 aaPredicted RBP6.64□□□□□ -1.35
CNOT4-201ENST00000315544 TREM2Q9NZC2 230 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 MYEF2Q9P2K5 600 aaKnown RBP6.64□□□□□ -1.35
CNOT4-201ENST00000315544 ZNF835Q9Y2P0 537 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 DNAH3Q8TD57 4116 aa6.64□□□□□ -1.35
CNOT4-201ENST00000315544 TRAV24A0A0B4J272 114 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 IGKV1D-33P01593 117 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 IGKV1-33P01594 117 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 AMY2AP04746 511 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 MSMO1Q15800 293 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 LPAL2Q16609 132 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 SELENOHQ8IZQ5 122 aaKnown RBP6.63□□□□□ -1.35
CNOT4-201ENST00000315544 MDS2Q8NDY4 140 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 Q8TCH9 128 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 IL22RA2Q969J5 263 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 PIGTQ969N2 578 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 MRPL48Q96GC5 212 aaKnown RBP6.63□□□□□ -1.35
CNOT4-201ENST00000315544 ABHD14AQ9BUJ0 271 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 CHIAQ9BZP6 476 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 MTCH1Q9NZJ7 389 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 LOXL2Q9Y4K0 774 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 TAAR5O14804 337 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 FHITP49789 147 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 RBM11P57052 281 aaKnown RBP6.63□□□□□ -1.35
CNOT4-201ENST00000315544 PPP1R3BQ86XI6 285 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 C15orf54Q8N8G6 183 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 OR56B1Q8NGI3 324 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 OR2G3Q8NGZ4 309 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 COQ8AQ8NI60 647 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 POM121L2Q96KW2 1035 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 FGF21Q9NSA1 209 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 PDZD2O15018 2839 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 C11orf98E9PRG8 122 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 EIF1BO60739 113 aaKnown RBP6.63□□□□□ -1.35
CNOT4-201ENST00000315544 COX5BP10606 129 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 CTSEP14091 401 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 ZNF14P17017 642 aaPredicted RBP6.63□□□□□ -1.35
CNOT4-201ENST00000315544 FBLP22087 321 aaKnown RBP6.63□□□□□ -1.35
CNOT4-201ENST00000315544 EIF1P41567 113 aaKnown RBP6.63□□□□□ -1.35
CNOT4-201ENST00000315544 GABREP78334 506 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 POU3F1Q03052 451 aaPredicted RBP6.63□□□□□ -1.35
CNOT4-201ENST00000315544 ELOBQ15370 118 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 ZNF676Q8N7Q3 588 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 Q8NA96 180 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 KCNG3Q8TAE7 436 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 MBD3L1Q8WWY6 194 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 TMEM222Q9H0R3 208 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 SMDT1Q9H4I9 107 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 PPP4R1LQ9P1A2 415 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 SPACA6W5XKT8 324 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 CRYBG3Q68DQ2 2970 aa6.63□□□□□ -1.35
CNOT4-201ENST00000315544 DNAH1Q9P2D7 4330 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 DUX1O43812 170 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 IGKV1-5P01602 117 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 QDPRP09417 244 aa6.62□□□□□ -1.35
CNOT4-201ENST00000315544 RPL4P36578 427 aaKnown RBP6.62□□□□□ -1.35
CNOT4-201ENST00000315544 TDGF1P3P51864 188 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms