RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 IGHV1-8P0DP01 117 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 PEX2P28328 305 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 ACTA2P62736 377 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 ACTG2P63267 376 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 ZNF91Q05481 1191 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 DYNC1I2Q13409 638 aaKnown RBP15.82■□□□□ 0.12
LIME1-201ENST00000309546 FAM189A2Q15884 450 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 SLC25A30Q5SVS4 291 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 UTS2BQ765I0 119 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 TCF23Q7RTU1 214 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 DYNAPQ8N1N2 210 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 ACBD7Q8N6N7 88 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 OR52N4Q8NGI2 321 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 OR51A4Q8NGJ6 313 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 OR10AC1Q8NH08 325 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 LGALS12Q96DT0 336 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 MBOAT4Q96T53 435 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 HHLA2Q9UM44 414 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 hADV38S2A0JD32 116 aa15.81■□□□□ 0.12
LIME1-201ENST00000309546 CHST1O43916 411 aa15.81■□□□□ 0.12
LIME1-201ENST00000309546 ISG15P05161 165 aa15.81■□□□□ 0.12
LIME1-201ENST00000309546 C2orf68Q2NKX9 166 aa15.81■□□□□ 0.12
LIME1-201ENST00000309546 FDX2Q6P4F2 183 aa15.81■□□□□ 0.12
LIME1-201ENST00000309546 ZNF676Q8N7Q3 588 aa15.81■□□□□ 0.12
LIME1-201ENST00000309546 OR5D18Q8NGL1 313 aa15.81■□□□□ 0.12
LIME1-201ENST00000309546 OR13C9Q8NGT0 318 aa15.81■□□□□ 0.12
LIME1-201ENST00000309546 OR2T6Q8NHC8 308 aa15.81■□□□□ 0.12
LIME1-201ENST00000309546 SPSB1Q96BD6 273 aa15.81■□□□□ 0.12
LIME1-201ENST00000309546 FOXRED1Q96CU9 486 aaPredicted RBP15.81■□□□□ 0.12
LIME1-201ENST00000309546 PELI1Q96FA3 418 aa15.81■□□□□ 0.12
LIME1-201ENST00000309546 SPACA5Q96QH8 159 aa15.81■□□□□ 0.12
LIME1-201ENST00000309546 ALG8Q9BVK2 526 aa15.81■□□□□ 0.12
LIME1-201ENST00000309546 NPFFR1Q9GZQ6 430 aa15.81■□□□□ 0.12
LIME1-201ENST00000309546 RANBP3Q9H6Z4 567 aaPredicted RBP15.81■□□□□ 0.12
LIME1-201ENST00000309546 NEK6Q9HC98 313 aa15.81■□□□□ 0.12
LIME1-201ENST00000309546 ABCB10Q9NRK6 738 aa15.81■□□□□ 0.12
LIME1-201ENST00000309546 TBL2Q9Y4P3 447 aaKnown RBP15.81■□□□□ 0.12
LIME1-201ENST00000309546 ODF3BA8MYP8 253 aa15.8■□□□□ 0.12
LIME1-201ENST00000309546 SIRPB1O00241 398 aa15.8■□□□□ 0.12
LIME1-201ENST00000309546 PSPNO60542 156 aa15.8■□□□□ 0.12
LIME1-201ENST00000309546 RBP4P02753 201 aa15.8■□□□□ 0.12
LIME1-201ENST00000309546 RAB13P51153 203 aa15.8■□□□□ 0.12
LIME1-201ENST00000309546 EFNB2P52799 333 aa15.8■□□□□ 0.12
LIME1-201ENST00000309546 MEF2CQ06413 473 aaPredicted RBP15.8■□□□□ 0.12
LIME1-201ENST00000309546 ALKBH1Q13686 389 aaKnown RBP15.8■□□□□ 0.12
LIME1-201ENST00000309546 SSX2Q16385 188 aa15.8■□□□□ 0.12
LIME1-201ENST00000309546 ZNF626Q68DY1 528 aa15.8■□□□□ 0.12
LIME1-201ENST00000309546 CRIP3Q6Q6R5 217 aa15.8■□□□□ 0.12
LIME1-201ENST00000309546 LIAT1Q6ZQX7 453 aa15.8■□□□□ 0.12
LIME1-201ENST00000309546 Q6ZTK2 550 aa15.8■□□□□ 0.12
LIME1-201ENST00000309546 TRAPPC6BQ86SZ2 158 aa15.8■□□□□ 0.12
LIME1-201ENST00000309546 LHFPL3Q86UP9 236 aa15.8■□□□□ 0.12
LIME1-201ENST00000309546 OR4S1Q8NGB4 309 aa15.8■□□□□ 0.12
LIME1-201ENST00000309546 FAM110DQ8TAY7 271 aaPredicted RBP15.8■□□□□ 0.12
LIME1-201ENST00000309546 MRPL48Q96GC5 212 aaKnown RBP15.8■□□□□ 0.12
LIME1-201ENST00000309546 C9orf16Q9BUW7 83 aa15.8■□□□□ 0.12
LIME1-201ENST00000309546 GLS2Q9UI32 602 aa15.8■□□□□ 0.12
LIME1-201ENST00000309546 EXOGQ9Y2C4 368 aaKnown RBP15.8■□□□□ 0.12
LIME1-201ENST00000309546 GSTK1Q9Y2Q3 226 aa15.8■□□□□ 0.12
LIME1-201ENST00000309546 FAM90A8PA6NJQ4 464 aa15.79■□□□□ 0.12
LIME1-201ENST00000309546 E9PQ18 207 aa15.79■□□□□ 0.12
LIME1-201ENST00000309546 DBTP11182 482 aaKnown RBP15.79■□□□□ 0.12
LIME1-201ENST00000309546 KIR2DS4P43632 304 aa15.79■□□□□ 0.12
LIME1-201ENST00000309546 CCR9P51686 369 aa15.79■□□□□ 0.12
LIME1-201ENST00000309546 PDZK1IP1Q13113 114 aa15.79■□□□□ 0.12
LIME1-201ENST00000309546 HERPUD1Q15011 391 aa15.79■□□□□ 0.12
LIME1-201ENST00000309546 PDLIM3Q53GG5 364 aaPredicted RBP15.79■□□□□ 0.12
LIME1-201ENST00000309546 SPIN3Q5JUX0 258 aa15.79■□□□□ 0.12
LIME1-201ENST00000309546 HIST2H2BDQ6DRA6 164 aa15.79■□□□□ 0.12
LIME1-201ENST00000309546 KLHDC1Q8N7A1 406 aa15.79■□□□□ 0.12
LIME1-201ENST00000309546 C11orf44Q8N8P7 122 aa15.79■□□□□ 0.12
LIME1-201ENST00000309546 PIFOQ8TCI5 191 aa15.79■□□□□ 0.12
LIME1-201ENST00000309546 AMBNQ9NP70 447 aa15.79■□□□□ 0.12
LIME1-201ENST00000309546 EXOSC4Q9NPD3 245 aaKnown RBP15.79■□□□□ 0.12
LIME1-201ENST00000309546 FOXJ3Q9UPW0 622 aa15.79■□□□□ 0.12
LIME1-201ENST00000309546 MYRFQ9Y2G1 1151 aa15.79■□□□□ 0.12
LIME1-201ENST00000309546 LINC00312Q9Y6C7 94 aa15.79■□□□□ 0.12
LIME1-201ENST00000309546 IGKV1-12A0A0C4DH73 117 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 OR4C45A6NMZ5 311 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 MGST3O14880 152 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 IGKV1D-12P01611 117 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 CSF1P09603 554 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 VSIG10L2P0DP72 767 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 GABRB1P18505 474 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 OR3A1P47881 315 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 ZNF146Q15072 292 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 LDLRAD2Q5SZI1 272 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 RNF144BQ7Z419 303 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 TMEM219Q86XT9 240 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 OR11H6Q8NGC7 330 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 RPS4Y2Q8TD47 263 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 MALSU1Q96EH3 234 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 MYCBPQ99417 103 aaPredicted RBP15.78■□□□□ 0.12
LIME1-201ENST00000309546 ISG20L2Q9H9L3 353 aaKnown RBP15.78■□□□□ 0.12
LIME1-201ENST00000309546 HMG20AQ9NP66 347 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 TCF19Q9Y242 345 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 SESN1Q9Y6P5 492 aa15.78■□□□□ 0.12
LIME1-201ENST00000309546 VGLL3A8MV65 326 aa15.77■□□□□ 0.12
LIME1-201ENST00000309546 MPZL2O60487 215 aa15.77■□□□□ 0.12
LIME1-201ENST00000309546 HCKP08631 526 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms