RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 HAND1O96004 215 aa9.12□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 FAM157CP0CG43 387 aa9.12□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 CALCBP10092 127 aa9.12□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 COL10A1Q03692 680 aa9.12□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 UBE2UQ5VVX9 321 aa9.12□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 AWAT2Q6E213 333 aa9.12□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 CMTM4Q8IZR5 234 aa9.12□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 CD177Q8N6Q3 437 aa9.12□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 PPP1R35Q8TAP8 253 aa9.12□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 NANPQ8TBE9 248 aa9.12□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 PHYHIPQ92561 330 aa9.12□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 FAM234AQ9H0X4 552 aa9.12□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 HMG20AQ9NP66 347 aa9.12□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 ONECUT1Q9UBC0 465 aa9.12□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 RPUSD1Q9UJJ7 312 aaKnown RBP9.12□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 ING4Q9UNL4 249 aa9.12□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 TEP1Q99973 2627 aaKnown RBP9.12□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 TRBV23-1A0A0A0MS06 115 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 IGKV1-12A0A0C4DH73 117 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 KIR2DS1A0A191URI9 304 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 A0A1W2PPH5 198 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 MAGEA13PA6NCF6 341 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 F8VVB4 439 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 F8VWA3 439 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 CCRL2O00421 344 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 ZNF780AO75290 641 aaPredicted RBP9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 SC5DO75845 299 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 HTR3BO95264 441 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 IFNA2P01563 188 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 IGKV1D-12P01611 117 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 TK1P04183 234 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 SFTPBP07988 381 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 PPIAL4GP0DN37 164 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 ZNF44P15621 663 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 AMY2BP19961 511 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 SERPINA2P20848 420 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 GABRR1P24046 479 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 MYL9P24844 172 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 PTGFRP43088 359 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 FGF12P61328 243 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 PAX2Q02962 417 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 GPR176Q14439 515 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 INSL4Q14641 139 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 ZNF146Q15072 292 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 FAM27D1Q5T7N8 215 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 GLT8D1Q68CQ7 371 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 UNQ9370/PRO34162Q6UXP9 181 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 GDPD3Q7L5L3 318 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 RNF144BQ7Z419 303 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 C1QL2Q7Z5L3 287 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 CDH26Q8IXH8 852 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 FAM185AQ8N0U4 392 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 FGFRL1Q8N441 504 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 MUL1Q969V5 352 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 FOXRED1Q96CU9 486 aaPredicted RBP9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 SNX22Q96L94 193 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 NKX3-1Q99801 234 aaPredicted RBP9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 DCTN5Q9BTE1 182 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 CNTD2Q9H8S5 307 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 NDUFB11Q9NX14 153 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 IL36RNQ9UBH0 155 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 METRNQ9UJH8 293 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 MRPS28Q9Y2Q9 187 aaKnown RBP9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 MAB21L2Q9Y586 359 aa9.11□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 SONP18583 2426 aaKnown RBP9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 A0A087WXM4 84 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 SIRPB1O00241 398 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 PIN1P1O15428 100 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 CDRT1O95170 752 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 UCHL1P09936 223 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 ADRA2CP18825 462 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 SRMP19623 302 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 CALRP27797 417 aaKnown RBP9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 DUSP1P28562 367 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 EDDM3BP56851 147 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 FABP5Q01469 135 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 PAX8Q06710 450 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 BLMHQ13867 455 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 IL13RA2Q14627 380 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 GRK1Q15835 563 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 NEDD8Q15843 81 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 SSX1Q16384 188 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 CRIP3Q6Q6R5 217 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 OR8H2Q8N162 312 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 OR5D13Q8NGL4 314 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 OR10K1Q8NGX5 313 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 C8orf46Q8TAG6 207 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 TBC1D15Q8TC07 691 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 DMRTB1Q96MA1 342 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 NR1H4Q96RI1 486 aaPredicted RBP9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 UQCC2Q9BRT2 126 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 PCGF1Q9BSM1 259 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 SEBOXQ9HB31 216 aaPredicted RBP9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 IL36GQ9NZH8 169 aa9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 FN1P02751 2386 aaKnown RBP9.1□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 TRAV40A0A0B4J280 105 aa9.09□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 FUOMA2VDF0 154 aa9.09□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 K7N7A8 449 aa9.09□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 FCN3O75636 299 aa9.09□□□□□ -0.95
CSPG4P2Y-201ENST00000306853 TOX4O94842 621 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms