RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 PTX4Q96A99 478 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 KCTD12Q96CX2 325 aaKnown RBP7.92□□□□□ -1.14
RFX3-201ENST00000302303 BPESC1Q9GZL8 116 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 BARX1Q9HBU1 254 aaPredicted RBP7.92□□□□□ -1.14
RFX3-201ENST00000302303 ABRACLQ9P1F3 81 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 NLKQ9UBE8 527 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 CTSZQ9UBR2 303 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 PPIAL4AQ9Y536 164 aa7.92□□□□□ -1.14
RFX3-201ENST00000302303 CELSR1Q9NYQ6 3014 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 OTOGQ6ZRI0 2925 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 PRRC2AP48634 2157 aaKnown RBP7.91□□□□□ -1.14
RFX3-201ENST00000302303 A0A075B6Q4 140 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 LRRC30A6NM36 301 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 OR2AT4A6NND4 320 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 CLDN25C9JDP6 229 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 RAB27BO00194 218 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 GEMIN2O14893 280 aaKnown RBP7.91□□□□□ -1.14
RFX3-201ENST00000302303 SOCS1O15524 211 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 PSPNO60542 156 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 ZNF780AO75290 641 aaPredicted RBP7.91□□□□□ -1.14
RFX3-201ENST00000302303 ZNF737O75373 536 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 KNG1P01042 644 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 GYPAP02724 150 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 SELLP14151 372 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 MUC1P15941 1255 aaPredicted RBP7.91□□□□□ -1.14
RFX3-201ENST00000302303 PRKACAP17612 351 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 RAB6AP20340 208 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 SCAND1P57086 179 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 DYNC1I2Q13409 638 aaKnown RBP7.91□□□□□ -1.14
RFX3-201ENST00000302303 TAF9Q16594 264 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 PRSS57Q6UWY2 283 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 ZNF788Q6ZQV5 615 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 Q8IYB0 196 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 C1orf87Q8N0U7 546 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 FGFRL1Q8N441 504 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 KCNG3Q8TAE7 436 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 HPS1Q92902 700 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 EMG1Q92979 244 aaKnown RBP7.91□□□□□ -1.14
RFX3-201ENST00000302303 MRPS24Q96EL2 167 aaKnown RBP7.91□□□□□ -1.14
RFX3-201ENST00000302303 SHARPINQ9H0F6 387 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 IFT22Q9H7X7 185 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 ELL3Q9HB65 397 aaPredicted RBP7.91□□□□□ -1.14
RFX3-201ENST00000302303 MYOZ1Q9NP98 299 aaPredicted RBP7.91□□□□□ -1.14
RFX3-201ENST00000302303 ST3GAL6Q9Y274 331 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 KCNK7Q9Y2U2 307 aa7.91□□□□□ -1.14
RFX3-201ENST00000302303 SETXQ7Z333 2677 aaKnown RBP7.9□□□□□ -1.14
RFX3-201ENST00000302303 TRAV24A0A0B4J272 114 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 TMEM82A0PJX8 343 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 F5H0A9 414 aaPredicted RBP7.9□□□□□ -1.14
RFX3-201ENST00000302303 PPIHO43447 177 aaKnown RBP7.9□□□□□ -1.14
RFX3-201ENST00000302303 NOL3O60936 208 aaKnown RBP7.9□□□□□ -1.14
RFX3-201ENST00000302303 CRTAPO75718 401 aaPredicted RBP7.9□□□□□ -1.14
RFX3-201ENST00000302303 MPIG6BO95866 241 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 OR2H2O95918 312 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 CYB5AP00167 134 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 EIF4EP06730 217 aaKnown RBP7.9□□□□□ -1.14
RFX3-201ENST00000302303 WNT2P09544 360 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 GTF2F2P13984 249 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 PRDX2P32119 198 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 NR4A2P43354 598 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 PDLIM4P50479 330 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 BMXP51813 675 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 SNU13P55769 128 aaKnown RBP7.9□□□□□ -1.14
RFX3-201ENST00000302303 LMO4P61968 165 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 GPR176Q14439 515 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 CLEC12BQ2HXU8 276 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 TMEM155Q4W5P6 130 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 PLAC9Q5JTB6 97 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 C17orf107Q6ZR85 190 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 CMTM4Q8IZR5 234 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 FAM168AQ92567 244 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 SDSLQ96GA7 329 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 GAFA1Q96PS6 74 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 CCL13Q99616 98 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 FOXC2Q99958 501 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 SELENOIQ9C0D9 397 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 ABCG5Q9H222 651 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 RCC2Q9P258 522 aaKnown RBP7.9□□□□□ -1.14
RFX3-201ENST00000302303 KAAG1Q9UBP8 84 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 RAB22AQ9UL26 194 aa7.9□□□□□ -1.14
RFX3-201ENST00000302303 TRAV38-1A0A0B4J264 116 aa7.89□□□□□ -1.15
RFX3-201ENST00000302303 IGHV4-61A0A0C4DH41 118 aa7.89□□□□□ -1.15
RFX3-201ENST00000302303 CEACAM18A8MTB9 384 aa7.89□□□□□ -1.15
RFX3-201ENST00000302303 NDUFS8O00217 210 aa7.89□□□□□ -1.15
RFX3-201ENST00000302303 HPGDSO60760 199 aa7.89□□□□□ -1.15
RFX3-201ENST00000302303 HAND1O96004 215 aa7.89□□□□□ -1.15
RFX3-201ENST00000302303 CSTBP04080 98 aaKnown RBP7.89□□□□□ -1.15
RFX3-201ENST00000302303 IRF2P14316 349 aa7.89□□□□□ -1.15
RFX3-201ENST00000302303 ELK1P19419 428 aa7.89□□□□□ -1.15
RFX3-201ENST00000302303 CHATP28329 748 aa7.89□□□□□ -1.15
RFX3-201ENST00000302303 IL2RGP31785 369 aa7.89□□□□□ -1.15
RFX3-201ENST00000302303 MDH2P40926 338 aaKnown RBP7.89□□□□□ -1.15
RFX3-201ENST00000302303 GPR6P46095 362 aaPredicted RBP7.89□□□□□ -1.15
RFX3-201ENST00000302303 CAPZA1P52907 286 aa7.89□□□□□ -1.15
RFX3-201ENST00000302303 SEC61A1P61619 476 aaKnown RBP7.89□□□□□ -1.15
RFX3-201ENST00000302303 IL13RA2Q14627 380 aa7.89□□□□□ -1.15
RFX3-201ENST00000302303 MICBQ29980 383 aa7.89□□□□□ -1.15
RFX3-201ENST00000302303 SMIM21Q3B7S5 101 aa7.89□□□□□ -1.15
RFX3-201ENST00000302303 SPIN3Q5JUX0 258 aa7.89□□□□□ -1.15
RFX3-201ENST00000302303 BRICD5Q6PL45 260 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms