RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ABI3Q9P2A4 366 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 BOD1L1Q8NFC6 3051 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 GJE1A6NN92 205 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 IAPPP10997 89 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 RAB11AP62491 216 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 SRSF3P84103 164 aaKnown RBP12.33□□□□□ -0.44
SDC2-201ENST00000302190 ARHGEF39Q8N4T4 335 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 OR13G1Q8NGZ3 307 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 GFOD1Q9NXC2 390 aa12.33□□□□□ -0.44
SDC2-201ENST00000302190 G3V3Q6 166 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 DHRS3O75911 302 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 MUC1P15941 1255 aaPredicted RBP12.32□□□□□ -0.44
SDC2-201ENST00000302190 GPX4P36969 197 aaPredicted RBP12.32□□□□□ -0.44
SDC2-201ENST00000302190 F2RL1P55085 397 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 CASP6P55212 293 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 HLA-BQ31612 363 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 RABEPKQ7Z6M1 372 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 D2HGDHQ8N465 521 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 EDARADDQ8WWZ3 215 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 NAT6Q93015 286 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 RHOVQ96L33 236 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 ALX4Q9H161 411 aaPredicted RBP12.32□□□□□ -0.44
SDC2-201ENST00000302190 PPP1R3CQ9UQK1 317 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 CD300LBA8K4G0 201 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 TUSC2O75896 110 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 HPNP05981 417 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 FBP1P09467 338 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 TBPP20226 339 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 ALDH3B1P43353 468 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 CLDN15P56746 228 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 TEX30Q5JUR7 227 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 NELFAQ9H3P2 528 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 GNG13Q9P2W3 67 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 AK3Q9UIJ7 227 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 MUC6Q6W4X9 2439 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 LOC102725191A0A1B0GVB3 256 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 ACTL6AO96019 429 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 CHATP28329 748 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 GPM6AP51674 278 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 RPL23AP62750 156 aaKnown RBP12.32□□□□□ -0.44
SDC2-201ENST00000302190 ZXDAP98168 799 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 GUK1Q16774 197 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 PLAC9Q5JTB6 97 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.32□□□□□ -0.44
SDC2-201ENST00000302190 ZNF561Q8N587 486 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 OR8U1Q8NH10 309 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 CYYR1Q96J86 154 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 SPIN2AQ99865 258 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 SPIN2BQ9BPZ2 258 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 RAB18Q9NP72 206 aa12.32□□□□□ -0.44
SDC2-201ENST00000302190 A0A1W2PQD3 144 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 SOX15O60248 233 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 TMEM127O75204 238 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 STARD6P59095 220 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 KIAA0141Q14154 515 aaPredicted RBP12.31□□□□□ -0.44
SDC2-201ENST00000302190 BIVMQ86UB2 503 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 SKA3Q8IX90 412 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 ZNF319Q9P2F9 582 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 LPAR3Q9UBY5 353 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 TRAPPC2LQ9UL33 140 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 RNF150Q9ULK6 438 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 HDGFL3Q9Y3E1 203 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 RNF222A6NCQ9 220 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 IGHV2-70P01814 119 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 H2AFB1P0C5Y9 115 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 P2RY4P51582 365 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 IGLV3-21P80748 117 aaPredicted RBP12.31□□□□□ -0.44
SDC2-201ENST00000302190 NHLH2Q02577 135 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 CCDC54Q8NEL0 328 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 NINJ1Q92982 152 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 FAM206AQ9NX38 181 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 SERPINE3A8MV23 424 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 GRPP07492 148 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 RAB5CP51148 216 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 OSR2Q8N2R0 312 aa12.31□□□□□ -0.44
SDC2-201ENST00000302190 DHRS7CA6NNS2 312 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 ZNF814B7Z6K7 855 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 IDH3GP51553 393 aaPredicted RBP12.3□□□□□ -0.44
SDC2-201ENST00000302190 ZNF133P52736 654 aaPredicted RBP12.3□□□□□ -0.44
SDC2-201ENST00000302190 CNEP1R1Q8N9A8 125 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 NECAP1Q8NC96 275 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 CLCC1Q96S66 551 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 PLK3Q9H4B4 646 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 MMP26Q9NRE1 261 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 PLA2G3Q9NZ20 509 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 OR2C1O95371 312 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 IFNA17P01571 189 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 EIF2S3P41091 472 aaKnown RBP12.3□□□□□ -0.44
SDC2-201ENST00000302190 PCP4P48539 62 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 PLPPR5Q32ZL2 321 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 HIST2H3AQ71DI3 136 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 THNSL2Q86YJ6 484 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 ZNF837Q96EG3 531 aaPredicted RBP12.3□□□□□ -0.44
SDC2-201ENST00000302190 ANXA10Q9UJ72 324 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 COL4A2P08572 1712 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 A0A1W2PPH5 198 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 ANKRD30BLA7E2S9 258 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 TERTO14746 1132 aaKnown RBP12.3□□□□□ -0.44
SDC2-201ENST00000302190 CYB561P49447 251 aa12.3□□□□□ -0.44
SDC2-201ENST00000302190 SPEM1Q8N4L4 309 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms