RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 PDLIM3Q53GG5 364 aaPredicted RBP17.7■□□□□ 0.42
SMCO4-201ENST00000298966 GLIPR1L1Q6UWM5 242 aa17.7■□□□□ 0.42
SMCO4-201ENST00000298966 ZNF573Q86YE8 665 aa17.7■□□□□ 0.42
SMCO4-201ENST00000298966 SNX29P2Q8IUI4 249 aa17.7■□□□□ 0.42
SMCO4-201ENST00000298966 CHPT1Q8WUD6 406 aa17.7■□□□□ 0.42
SMCO4-201ENST00000298966 MRPS24Q96EL2 167 aaKnown RBP17.7■□□□□ 0.42
SMCO4-201ENST00000298966 RHOFQ9HBH0 211 aa17.7■□□□□ 0.42
SMCO4-201ENST00000298966 TMEM100Q9NV29 134 aa17.7■□□□□ 0.42
SMCO4-201ENST00000298966 NKIRAS2Q9NYR9 191 aa17.7■□□□□ 0.42
SMCO4-201ENST00000298966 GPR160Q9UJ42 338 aa17.7■□□□□ 0.42
SMCO4-201ENST00000298966 IGLV3-9A0A075B6K5 115 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 LYNX1G3V0Z9 82 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 TIMM8AO60220 97 aaPredicted RBP17.69■□□□□ 0.42
SMCO4-201ENST00000298966 CYB5AP00167 134 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 CHRM2P08172 466 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 LYNX1P0DP58 116 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 OR3A4PP47883 348 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 KLF3P57682 345 aaPredicted RBP17.69■□□□□ 0.42
SMCO4-201ENST00000298966 ERVS71-1P61550 626 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 QRFPP83859 136 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 SCN1BQ07699 218 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 BAK1Q16611 211 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 PRR31Q5SQ13 230 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 HACD4Q5VWC8 232 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 TEX29Q8N6K0 151 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 OR13G1Q8NGZ3 307 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 OR8S1Q8NH09 359 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 NPRL2Q8WTW4 380 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 HPSE2Q8WWQ2 592 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 URM1Q9BTM9 101 aaKnown RBP17.69■□□□□ 0.42
SMCO4-201ENST00000298966 PKIBQ9C010 78 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 METTL9Q9H1A3 318 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 LPAR2Q9HBW0 351 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 C14orf119Q9NWQ9 140 aa17.69■□□□□ 0.42
SMCO4-201ENST00000298966 XRCC3O43542 346 aa17.68■□□□□ 0.42
SMCO4-201ENST00000298966 GSTZ1O43708 216 aaPredicted RBP17.68■□□□□ 0.42
SMCO4-201ENST00000298966 MSMBP08118 114 aa17.68■□□□□ 0.42
SMCO4-201ENST00000298966 VSIG8P0DPA2 414 aa17.68■□□□□ 0.42
SMCO4-201ENST00000298966 MPV17P39210 176 aa17.68■□□□□ 0.42
SMCO4-201ENST00000298966 MMP15P51511 669 aa17.68■□□□□ 0.42
SMCO4-201ENST00000298966 PRSS12P56730 875 aa17.68■□□□□ 0.42
SMCO4-201ENST00000298966 TMEM69Q5SWH9 247 aa17.68■□□□□ 0.42
SMCO4-201ENST00000298966 CRIP3Q6Q6R5 217 aa17.68■□□□□ 0.42
SMCO4-201ENST00000298966 MKXQ8IYA7 352 aa17.68■□□□□ 0.42
SMCO4-201ENST00000298966 BHLHE23Q8NDY6 225 aa17.68■□□□□ 0.42
SMCO4-201ENST00000298966 FAM46BQ96A09 425 aa17.68■□□□□ 0.42
SMCO4-201ENST00000298966 RNF170Q96K19 258 aa17.68■□□□□ 0.42
SMCO4-201ENST00000298966 C1orf147Q96MC9 270 aaPredicted RBP17.68■□□□□ 0.42
SMCO4-201ENST00000298966 SPACA5Q96QH8 159 aa17.68■□□□□ 0.42
SMCO4-201ENST00000298966 ABHD1Q96SE0 405 aa17.68■□□□□ 0.42
SMCO4-201ENST00000298966 ADAT1Q9BUB4 502 aaKnown RBP17.68■□□□□ 0.42
SMCO4-201ENST00000298966 A0A1W2PQ09 198 aa17.67■□□□□ 0.42
SMCO4-201ENST00000298966 KDM4BO94953 1096 aa17.67■□□□□ 0.42
SMCO4-201ENST00000298966 TMEM225BP0DP42 221 aa17.67■□□□□ 0.42
SMCO4-201ENST00000298966 EPHA1P21709 976 aa17.67■□□□□ 0.42
SMCO4-201ENST00000298966 CDK2P24941 298 aa17.67■□□□□ 0.42
SMCO4-201ENST00000298966 GPR6P46095 362 aaPredicted RBP17.67■□□□□ 0.42
SMCO4-201ENST00000298966 EFNB2P52799 333 aa17.67■□□□□ 0.42
SMCO4-201ENST00000298966 PDZK1IP1Q13113 114 aa17.67■□□□□ 0.42
SMCO4-201ENST00000298966 ARL6IP1Q15041 203 aa17.67■□□□□ 0.42
SMCO4-201ENST00000298966 AWAT1Q58HT5 328 aa17.67■□□□□ 0.42
SMCO4-201ENST00000298966 TRIQKQ629K1 86 aa17.67■□□□□ 0.42
SMCO4-201ENST00000298966 OR51F2Q8NH61 342 aa17.67■□□□□ 0.42
SMCO4-201ENST00000298966 CLDND2Q8NHS1 167 aa17.67■□□□□ 0.42
SMCO4-201ENST00000298966 TMEM59Q9BXS4 323 aa17.67■□□□□ 0.42
SMCO4-201ENST00000298966 NARFLQ9H6Q4 476 aa17.67■□□□□ 0.42
SMCO4-201ENST00000298966 ZNF732B4DXR9 585 aa17.66■□□□□ 0.42
SMCO4-201ENST00000298966 PTTG1O95997 202 aa17.66■□□□□ 0.42
SMCO4-201ENST00000298966 CSTBP04080 98 aaKnown RBP17.66■□□□□ 0.42
SMCO4-201ENST00000298966 CA6P23280 308 aa17.66■□□□□ 0.42
SMCO4-201ENST00000298966 PLA2G7Q13093 441 aa17.66■□□□□ 0.42
SMCO4-201ENST00000298966 ASAH1Q13510 395 aa17.66■□□□□ 0.42
SMCO4-201ENST00000298966 OXA1LQ15070 435 aa17.66■□□□□ 0.42
SMCO4-201ENST00000298966 OR8G1Q15617 311 aa17.66■□□□□ 0.42
SMCO4-201ENST00000298966 FAM76BQ5HYJ3 339 aa17.66■□□□□ 0.42
SMCO4-201ENST00000298966 MRPL24Q96A35 216 aaKnown RBP17.66■□□□□ 0.42
SMCO4-201ENST00000298966 NKX3-1Q99801 234 aaPredicted RBP17.66■□□□□ 0.42
SMCO4-201ENST00000298966 ATG5Q9H1Y0 275 aa17.66■□□□□ 0.42
SMCO4-201ENST00000298966 ING4Q9UNL4 249 aa17.66■□□□□ 0.42
SMCO4-201ENST00000298966 IGKV1-27A0A075B6S5 117 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 PLSCR5A0PG75 271 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 H3BUI4 141 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 AKR7A2O43488 359 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 CDC14BO60729 498 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 MPZP25189 248 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 GPM6AP51674 278 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 TAS2R20P59543 309 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 IL24Q13007 206 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 MADCAM1Q13477 382 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 RSU1Q15404 277 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 FAHD2BQ6P2I3 314 aaPredicted RBP17.65■□□□□ 0.42
SMCO4-201ENST00000298966 DCDC5Q6ZRR9 648 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 POC5Q8NA72 575 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 Q8NFD4 153 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 SMIM4Q8WVI0 70 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 RFT1Q96AA3 541 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 FAHD2AQ96GK7 314 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 TM2D1Q9BX74 207 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 SUCNR1Q9BXA5 334 aa17.65■□□□□ 0.42
SMCO4-201ENST00000298966 KCNK15Q9H427 330 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms