RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 NCOA6Q14686 2063 aaPredicted RBP13.62□□□□□ -0.23
UBAP1-201ENST00000297661 ELOA3CA0A087WX78 387 aaPredicted RBP13.62□□□□□ -0.23
UBAP1-201ENST00000297661 IGHV3-15A0A0B4J1V0 119 aa13.62□□□□□ -0.23
UBAP1-201ENST00000297661 LNP1A1A4G5 178 aa13.62□□□□□ -0.23
UBAP1-201ENST00000297661 G3V3Y1 287 aa13.62□□□□□ -0.23
UBAP1-201ENST00000297661 DEDDO75618 318 aa13.62□□□□□ -0.23
UBAP1-201ENST00000297661 CRTAPO75718 401 aaPredicted RBP13.62□□□□□ -0.23
UBAP1-201ENST00000297661 TRGC2P03986 189 aa13.62□□□□□ -0.23
UBAP1-201ENST00000297661 QDPRP09417 244 aa13.62□□□□□ -0.23
UBAP1-201ENST00000297661 PGA4P0DJD7 388 aa13.62□□□□□ -0.23
UBAP1-201ENST00000297661 PGA3P0DJD8 388 aa13.62□□□□□ -0.23
UBAP1-201ENST00000297661 PTGDSP41222 190 aa13.62□□□□□ -0.23
UBAP1-201ENST00000297661 RELQ04864 619 aaPredicted RBP13.62□□□□□ -0.23
UBAP1-201ENST00000297661 CYB5R2Q6BCY4 276 aa13.62□□□□□ -0.23
UBAP1-201ENST00000297661 DTX1Q86Y01 620 aa13.62□□□□□ -0.23
UBAP1-201ENST00000297661 OR10AD1Q8NGE0 317 aa13.62□□□□□ -0.23
UBAP1-201ENST00000297661 RARRES2Q99969 163 aa13.62□□□□□ -0.23
UBAP1-201ENST00000297661 NELFAQ9H3P2 528 aa13.62□□□□□ -0.23
UBAP1-201ENST00000297661 ZNF724A8MTY0 619 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 SDCBPO00560 298 aaPredicted RBP13.61□□□□□ -0.23
UBAP1-201ENST00000297661 ZNF17P17021 662 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 PPP1CCP36873 323 aaKnown RBP13.61□□□□□ -0.23
UBAP1-201ENST00000297661 TAGLN2P37802 199 aaKnown RBP13.61□□□□□ -0.23
UBAP1-201ENST00000297661 ERVFRD-1P60508 538 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 HIST2H3PS2Q5TEC6 136 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 NOXO1Q8NFA2 376 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 OR13G1Q8NGZ3 307 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 ARHGAP5-AS1Q96IT6 56 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 ARV1Q9H2C2 271 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 SPTBN4Q9H254 2564 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 PIEZO1Q92508 2521 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 TGIF2-C20orf24A0A0A6YYL0 155 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 TRAF3IP2O43734 574 aaPredicted RBP13.61□□□□□ -0.23
UBAP1-201ENST00000297661 PTBP3O95758 552 aaKnown RBP13.61□□□□□ -0.23
UBAP1-201ENST00000297661 IGHG1P01857 330 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 PAX1P15863 534 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 PRSS12P56730 875 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 GABREP78334 506 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 OR8G1Q15617 311 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 HLA-BQ31612 363 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 AADACL3Q5VUY0 350 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 OR2T2Q6IF00 324 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 C1QL2Q7Z5L3 287 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 ZNF283Q8N7M2 679 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 OR5H2Q8NGV7 314 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 RAB39BQ96DA2 213 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 ST6GALNAC5Q9BVH7 336 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 MYOTQ9UBF9 498 aa13.61□□□□□ -0.23
UBAP1-201ENST00000297661 TMEM14DPA8MWL7 114 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 ZNF878C9JN71 531 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 CYB5BO43169 146 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 SCGNO76038 276 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 KNG1P01042 644 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 SFTPCP11686 197 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 SERPINA2P20848 420 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 TMEM50BP56557 158 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 THEM4Q5T1C6 240 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 ZNF385CQ66K41 422 aaPredicted RBP13.6□□□□□ -0.23
UBAP1-201ENST00000297661 WDR74Q6RFH5 385 aaPredicted RBP13.6□□□□□ -0.23
UBAP1-201ENST00000297661 DPPA2Q7Z7J5 298 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 SH3BGRL3Q9H299 93 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 FIGNL2A6NMB9 653 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 H3BQ15 152 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 CDC14BO60729 498 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 SCGB1D2O95969 90 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 SNRPCP09234 159 aaKnown RBP13.6□□□□□ -0.23
UBAP1-201ENST00000297661 COX5BP10606 129 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 LMO1P25800 156 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 FOXO1Q12778 655 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 SHBQ15464 509 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 TMEM156Q8N614 296 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 PACRGQ96M98 296 aaPredicted RBP13.6□□□□□ -0.23
UBAP1-201ENST00000297661 MRPL37Q9BZE1 423 aaKnown RBP13.6□□□□□ -0.23
UBAP1-201ENST00000297661 WFDC1Q9HC57 220 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 CRLF2Q9HC73 371 aa13.6□□□□□ -0.23
UBAP1-201ENST00000297661 IGKV1-9A0A0C4DH69 117 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 A0A1W2PQM1 296 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 F5H5K5 113 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 MKRN2OSH3BPM6 223 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 CPEB2Q7Z5Q1 589 aaKnown RBP13.59□□□□□ -0.23
UBAP1-201ENST00000297661 LHFPL1Q86WI0 220 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 LRRC18Q8N456 261 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 C1orf147Q96MC9 270 aaPredicted RBP13.59□□□□□ -0.23
UBAP1-201ENST00000297661 SRPK3Q9UPE1 567 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 PHOX2AO14813 284 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 ZNF43P17038 809 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 IL2RGP31785 369 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 NUBP1P53384 320 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 CEBPGP53567 150 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 UBE2KP61086 200 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 CCL7P80098 99 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 ARFRP1Q13795 201 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 FNDC9Q8TBE3 224 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 POM121Q96HA1 1249 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 MRGPRX4Q96LA9 322 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 TMEM59Q9BXS4 323 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 SEMA5BQ9P283 1151 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 ANAPC10Q9UM13 185 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 OSGIN2Q9Y236 505 aa13.59□□□□□ -0.23
UBAP1-201ENST00000297661 BORCS7-ASMTA0A0B4J1R7 106 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms