RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 OTX1P32242 354 aaPredicted RBP10.43□□□□□ -0.74
SNIP1-201ENST00000296215 RNFT1Q5M7Z0 435 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 OR8B3Q8NGG8 313 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 OR52E1Q8NGJ3 308 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 AURKAIP1Q9NWT8 199 aaPredicted RBP10.43□□□□□ -0.74
SNIP1-201ENST00000296215 FRRS1LQ9P0K9 344 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 PPIL1Q9Y3C6 166 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 C2orf72A6NCS6 295 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 ZNF865P0CJ78 1059 aaPredicted RBP10.43□□□□□ -0.74
SNIP1-201ENST00000296215 ATP1B2P14415 290 aaPredicted RBP10.43□□□□□ -0.74
SNIP1-201ENST00000296215 NSDHLQ15738 373 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 SP6Q3SY56 376 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 WBP2Q969T9 261 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 VN1R3Q9BXE9 311 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 SERGEFQ9UGK8 458 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 TSSC4Q9Y5U2 329 aaPredicted RBP10.43□□□□□ -0.74
SNIP1-201ENST00000296215 H3BP45 60 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 GCM2O75603 506 aaPredicted RBP10.43□□□□□ -0.74
SNIP1-201ENST00000296215 SLURP2P0DP57 97 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 CD33P20138 364 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 IGFBP4P22692 258 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 NTSR1P30989 418 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 GAS1P54826 345 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 CEACAM21Q3KPI0 293 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 TMEM136Q6ZRR5 245 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 OLIG3Q7RTU3 272 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 KCNE4Q8WWG9 221 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 FAM131CQ96AQ9 280 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 BOD1Q96IK1 185 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 TAS2R4Q9NYW5 299 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 CES1P1Q9UKY3 287 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 SIRT4Q9Y6E7 314 aaPredicted RBP10.43□□□□□ -0.74
SNIP1-201ENST00000296215 SPAG17Q6Q759 2223 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 XRN1Q8IZH2 1706 aaKnown RBP10.43□□□□□ -0.74
SNIP1-201ENST00000296215 TRBV5-3A0A0A0MS03 114 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 MBLAC1A4D2B0 266 aaPredicted RBP10.43□□□□□ -0.74
SNIP1-201ENST00000296215 ZNF93P35789 620 aaPredicted RBP10.43□□□□□ -0.74
SNIP1-201ENST00000296215 SRSF4Q08170 494 aaKnown RBP10.43□□□□□ -0.74
SNIP1-201ENST00000296215 OR1Q1Q15612 314 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 DUSP5Q16690 384 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 ACSF3Q4G176 576 aaPredicted RBP10.43□□□□□ -0.74
SNIP1-201ENST00000296215 TMEM97Q5BJF2 176 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 GABRG3Q99928 467 aa10.43□□□□□ -0.74
SNIP1-201ENST00000296215 ZNF467Q7Z7K2 595 aaPredicted RBP10.42□□□□□ -0.74
SNIP1-201ENST00000296215 C5orf30Q96GV9 206 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 MRPL16Q9NX20 251 aaKnown RBP10.42□□□□□ -0.74
SNIP1-201ENST00000296215 ZNF257Q9Y2Q1 563 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 HS3ST3A1Q9Y663 406 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 CHEK1O14757 476 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 KLK8O60259 260 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 MPC1LP0DKB6 136 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 KLHDC8AQ8IYD2 350 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 GVQW1Q8N7I0 195 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 OR10G3Q8NGC4 313 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 C11orf40Q8WZ69 217 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 SPHK2Q9NRA0 654 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 G3V3Y1 287 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 EDIL3O43854 480 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 SERF1AO75920 110 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 GCSHP23434 173 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 RRADP55042 308 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 LCN2P80188 198 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 LY6KQ17RY6 165 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 MPV17L2Q567V2 206 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 C6orf201Q7Z4U5 140 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 C5orf17Q8NAS9 161 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 PTX4Q96A99 478 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 PDLIM7Q9NR12 457 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 PILRBQ9UKJ0 227 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 SLC22A13Q9Y226 551 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 FCF1Q9Y324 198 aaKnown RBP10.42□□□□□ -0.74
SNIP1-201ENST00000296215 HELTA6NFD8 242 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 MANSC4A6NHS7 340 aaPredicted RBP10.42□□□□□ -0.74
SNIP1-201ENST00000296215 ZNF85Q03923 595 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 CD300LDQ6UXZ3 194 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 WDR5BQ86VZ2 330 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 OR10A2Q9H208 303 aa10.42□□□□□ -0.74
SNIP1-201ENST00000296215 C1orf167Q5SNV9 1468 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 OR2T8A6NH00 312 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 MPZL1O95297 269 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 RPS12P25398 132 aaKnown RBP10.41□□□□□ -0.74
SNIP1-201ENST00000296215 ACRV1P26436 265 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 KIAA0040Q15053 153 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 DEFB128Q7Z7B8 93 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 C1orf174Q8IYL3 243 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 UMODL1-AS1Q8N2C9 162 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 OR2T6Q8NHC8 308 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 TMEM45BQ96B21 275 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 NRN1Q9NPD7 142 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 TMEM38BQ9NVV0 291 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 TAC3Q9UHF0 121 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 DICER1Q9UPY3 1922 aaKnown RBP10.41□□□□□ -0.74
SNIP1-201ENST00000296215 TMEM272A0A1B0GTI8 110 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 STATHP02808 62 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 SMIM13P0DJ93 91 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 SLCO4C1Q6ZQN7 724 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 SSX8Q7RTT4 187 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 PPTC7Q8NI37 304 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 CLDN23Q96B33 292 aa10.41□□□□□ -0.74
SNIP1-201ENST00000296215 DCBLD2Q96PD2 775 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms