RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 OR7C2O60412 319 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 ATP1A1-AS1Q5TC04 95 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 SRRQ9GZT4 340 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 C1RLQ9NZP8 487 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 A0A1W2PRD5 423 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 A0A1W2PRF3 423 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 A0A1W2PRM7 423 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 F2RL2O00254 374 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 HOXD11P31277 338 aaPredicted RBP15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 CRYBB2P43320 205 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 CLEC2AQ6UVW9 174 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 RBPMSQ93062 196 aaKnown RBP15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 CENPVL1A0A0U1RR11 272 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 OGG1O15527 345 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 MMP16P51512 607 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 SOX7Q9BT81 388 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 TRAF3IP2O43734 574 aaPredicted RBP15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 HAND1O96004 215 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 PRF1P14222 555 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 HOXB1P14653 301 aaPredicted RBP15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 FHL5Q5TD97 284 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 TMEM182Q6ZP80 229 aaPredicted RBP15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 PPP1R32Q7Z5V6 425 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 ZDHHC22Q8N966 263 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 ZFP62Q8NB50 900 aaPredicted RBP15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 ACY3Q96HD9 319 aa15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 NUDT16L1Q9BRJ7 211 aaKnown RBP15.56■□□□□ 0.08
CDC42EP3-201ENST00000295324 C8orf82Q6P1X6 216 aaPredicted RBP15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 KCNRGQ8N5I3 272 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 ASB13Q8WXK3 278 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 ADIPOR1Q96A54 375 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 MTCH1Q9NZJ7 389 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 AK3Q9UIJ7 227 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 IGHV3-43A0A0B4J1X8 118 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 CTAG2O75638 210 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 GOSR1O95249 250 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 IGHV3-43DP0DP04 118 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 UBE2MP61081 183 aaKnown RBP15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 Q56UQ5 140 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 KDF1Q8NAX2 398 aaPredicted RBP15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 DPF1Q92782 380 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 MAP6Q96JE9 813 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 SIPA1L1O43166 1804 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 H0Y8G0 127 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 DVL1O14640 695 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 PPP1R2P9O14990 202 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 COX7A2P2O60397 106 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 OR4A8P0C604 315 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 DVL1P1P54792 670 aaPredicted RBP15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 FAM122BQ7Z309 247 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 CDH26Q8IXH8 852 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 TMEM104Q8NE00 496 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 SLC7A10Q9NS82 523 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 ZNF230Q9UIE0 474 aaPredicted RBP15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 MRPS11P82912 194 aaKnown RBP15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 TMEM65Q6PI78 240 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 VSTM2AQ8TAG5 236 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 SAT2Q96F10 170 aaPredicted RBP15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 NEIL1Q96FI4 390 aaPredicted RBP15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 ADGRG7Q96K78 797 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 MTFP1Q9UDX5 166 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 LPAR6P43657 344 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 LIMK1P53667 647 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 CTF1Q16619 201 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 APH1BQ8WW43 257 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 OR2D2Q9H210 308 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 SLC52A3Q9NQ40 469 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 MED9Q9NWA0 146 aa15.55■□□□□ 0.08
CDC42EP3-201ENST00000295324 NTN1O95631 604 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 SEMG1P04279 462 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 FGF2P09038 288 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 TGM1P22735 817 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 LINC00303Q3SY05 128 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 ETFRF1Q6IPR1 90 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 C10orf111Q8N326 155 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 MSL2Q9HCI7 577 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 TMED3Q9Y3Q3 217 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 LTBP1Q14766 1721 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 TXNDC12O95881 172 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 PDGFAP04085 211 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 TAGLN2P37802 199 aaKnown RBP15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 SLC25A30Q5SVS4 291 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 LHX4Q969G2 390 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 OOEPA6NGQ2 149 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 MPPED2Q15777 294 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 GABRA6Q16445 453 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 Q6ZNX1 250 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 OR2J1Q9GZK6 312 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 TNFRSF19Q9NS68 423 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 ICE1Q9Y2F5 2266 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 A0A1W2PN81 502 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 SMLR1H3BR10 107 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 CHRNA7P36544 502 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 MPV17LQ2QL34 196 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 SCARB1Q8WTV0 552 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 SEBOXQ9HB31 216 aaPredicted RBP15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 FRRS1LQ9P0K9 344 aa15.54■□□□□ 0.08
CDC42EP3-201ENST00000295324 CA11O75493 328 aa15.53■□□□□ 0.08
CDC42EP3-201ENST00000295324 TIAF1O95411 115 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms