RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 FUT6P51993 359 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 CLDN18P56856 261 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 ZNF169Q14929 603 aaPredicted RBP13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 OR2A2Q6IF42 318 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 Q6ZSR3 168 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 POC1AQ8NBT0 407 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 BCO1Q9HAY6 547 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 IL36RNQ9UBH0 155 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 ESPL1Q14674 2120 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 RP1L1Q8IWN7 2480 aaPredicted RBP13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 TNFSF15O95150 251 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 NGFP01138 241 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 OR5AC1P0C628 307 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 HAAOP46952 286 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 MALLQ13021 153 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 EIF3IQ13347 325 aaKnown RBP13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 HS3ST6Q96QI5 342 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 DEFB127Q9H1M4 99 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 ABI3Q9P2A4 366 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 COL27A1Q8IZC6 1860 aaPredicted RBP13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 F8VVB4 439 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 F8VWA3 439 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 FBXO24O75426 580 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 CD59P13987 128 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 GGNBP1Q5YKI7 109 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 NEK7Q8TDX7 302 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 GPHA2Q96T91 129 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 DDA1Q9BW61 102 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 CYTL1Q9NRR1 136 aa13.65□□□□□ -0.22
NCKIPSD-201ENST00000294129 M0R296 226 aa13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 DIRAS3O95661 229 aa13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 MT-CO3P00414 261 aa13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 TMEM42Q69YG0 159 aa13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 RPL7L1Q6DKI1 246 aaKnown RBP13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 RTL6Q6ICC9 239 aa13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 MRPL21Q7Z2W9 205 aaKnown RBP13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 CCDC54Q8NEL0 328 aa13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 RTN4IP1Q8WWV3 396 aaPredicted RBP13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 ZNF705EA8MWA4 302 aaPredicted RBP13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 BCL3P20749 454 aa13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 TGIF1Q15583 401 aa13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 MCEMP1Q8IX19 187 aa13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 ZNF100Q8IYN0 542 aa13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 CLRN3Q8NCR9 226 aa13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 PHYHIPLQ96FC7 376 aa13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 PARP12Q9H0J9 701 aaKnown RBP13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 LIPGQ9Y5X9 500 aa13.64□□□□□ -0.23
NCKIPSD-201ENST00000294129 CDX4O14627 284 aaPredicted RBP13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 XRCC2O43543 280 aa13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 PRDX4Q13162 271 aa13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 OR8B8Q15620 311 aa13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 IGSF11Q5DX21 431 aa13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 MEX3BQ6ZN04 569 aaKnown RBP13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 APH1AQ96BI3 265 aa13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 SPRY4Q9C004 299 aa13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 FAM117AQ9C073 453 aa13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 HRH4Q9H3N8 390 aa13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 SAV1Q9H4B6 383 aaPredicted RBP13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 MEMO1Q9Y316 297 aa13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 KIAA2026Q5HYC2 2103 aa13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 IFNA21P01568 189 aa13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 CTSDP07339 412 aaPredicted RBP13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 RBM11P57052 281 aaKnown RBP13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 RAB1AP62820 205 aa13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 SRSF3P84103 164 aaKnown RBP13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 PLEKHN1Q494U1 663 aaPredicted RBP13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 HES3Q5TGS1 186 aa13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 DBX2Q6ZNG2 339 aa13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 NUFIP2Q7Z417 695 aaKnown RBP13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 NKX6-2Q9C056 277 aaPredicted RBP13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 RGCCQ9H4X1 137 aa13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 DIDO1Q9BTC0 2240 aaKnown RBP13.63□□□□□ -0.23
NCKIPSD-201ENST00000294129 TRBV6-7A0A0A0MS04 114 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 IGHV3-64DA0A0J9YX35 117 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 CRYM-AS1A6NIL9 109 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 AGPAT2O15120 278 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 PDCD6O75340 191 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 ZNF708P17019 499 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 NME2P22392 152 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 MEOX1P50221 254 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 PPA1Q15181 289 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 SURF2Q15527 256 aaPredicted RBP13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 SPATA46Q5T0L3 261 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 Q6ZPA2 131 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 TMPRSS7Q7RTY8 843 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 LYZL2Q7Z4W2 148 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 ZNF488Q96MN9 340 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 ZNF286AQ9HBT8 521 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 EDARQ9UNE0 448 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 STARD10Q9Y365 291 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 MED12LQ86YW9 2145 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 PET100P0DJ07 73 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 KRTAP27-1Q3LI81 207 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 HIKESHIQ53FT3 197 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 TMEM88Q6PEY1 159 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 ADAT1Q9BUB4 502 aaKnown RBP13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 C1QTNF5Q9BXJ0 243 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 PRSS50Q9UI38 385 aa13.62□□□□□ -0.23
NCKIPSD-201ENST00000294129 HSF4Q9ULV5 492 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms