RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 FGFRL1Q8N441 504 aa22.28■■□□□ 1.16
SSU72-201ENST00000291386 NKAIN3Q8N8D7 197 aa22.28■■□□□ 1.16
SSU72-201ENST00000291386 PNLDC1Q8NA58 520 aaKnown RBP22.28■■□□□ 1.16
SSU72-201ENST00000291386 ZNRF1Q8ND25 227 aa22.28■■□□□ 1.16
SSU72-201ENST00000291386 FAM234AQ9H0X4 552 aa22.28■■□□□ 1.16
SSU72-201ENST00000291386 C7orf69Q9H7B7 122 aa22.28■■□□□ 1.16
SSU72-201ENST00000291386 OR14J1Q9UGF5 321 aa22.28■■□□□ 1.16
SSU72-201ENST00000291386 SETD2Q9BYW2 2564 aaPredicted RBP22.28■■□□□ 1.16
SSU72-201ENST00000291386 RGS9O75916 674 aaPredicted RBP22.27■■□□□ 1.16
SSU72-201ENST00000291386 AVPP01185 164 aa22.27■■□□□ 1.16
SSU72-201ENST00000291386 MAS1P04201 325 aa22.27■■□□□ 1.16
SSU72-201ENST00000291386 CHRM2P08172 466 aa22.27■■□□□ 1.16
SSU72-201ENST00000291386 HOXB4P17483 251 aaPredicted RBP22.27■■□□□ 1.16
SSU72-201ENST00000291386 PRKACAP17612 351 aa22.27■■□□□ 1.16
SSU72-201ENST00000291386 MTNR1BP49286 362 aa22.27■■□□□ 1.16
SSU72-201ENST00000291386 CEBPDP49716 269 aaPredicted RBP22.27■■□□□ 1.16
SSU72-201ENST00000291386 HSD17B12Q53GQ0 312 aa22.27■■□□□ 1.16
SSU72-201ENST00000291386 FAM27D1Q5T7N8 215 aa22.27■■□□□ 1.16
SSU72-201ENST00000291386 C1orf229Q6ZS94 237 aaPredicted RBP22.27■■□□□ 1.16
SSU72-201ENST00000291386 LY6G5BQ8NDX9 201 aa22.27■■□□□ 1.16
SSU72-201ENST00000291386 C8orf46Q8TAG6 207 aa22.27■■□□□ 1.16
SSU72-201ENST00000291386 DCTN5Q9BTE1 182 aa22.27■■□□□ 1.16
SSU72-201ENST00000291386 PPIL3Q9H2H8 161 aaKnown RBP22.27■■□□□ 1.16
SSU72-201ENST00000291386 TCF7L1Q9HCS4 588 aa22.27■■□□□ 1.16
SSU72-201ENST00000291386 IL36GQ9NZH8 169 aa22.27■■□□□ 1.16
SSU72-201ENST00000291386 OPN4Q9UHM6 478 aa22.27■■□□□ 1.16
SSU72-201ENST00000291386 METRNQ9UJH8 293 aa22.27■■□□□ 1.16
SSU72-201ENST00000291386 RPUSD1Q9UJJ7 312 aaKnown RBP22.27■■□□□ 1.16
SSU72-201ENST00000291386 CCRL2O00421 344 aa22.26■■□□□ 1.15
SSU72-201ENST00000291386 PPIAL4GP0DN37 164 aa22.26■■□□□ 1.15
SSU72-201ENST00000291386 SRMP19623 302 aa22.26■■□□□ 1.15
SSU72-201ENST00000291386 OR3A4PP47883 348 aa22.26■■□□□ 1.15
SSU72-201ENST00000291386 FABP5Q01469 135 aa22.26■■□□□ 1.15
SSU72-201ENST00000291386 CD200R1LQ6Q8B3 271 aa22.26■■□□□ 1.15
SSU72-201ENST00000291386 MRI1Q9BV20 369 aa22.26■■□□□ 1.15
SSU72-201ENST00000291386 IL36RNQ9UBH0 155 aa22.26■■□□□ 1.15
SSU72-201ENST00000291386 AUP1Q9Y679 476 aa22.26■■□□□ 1.15
SSU72-201ENST00000291386 NIPBLQ6KC79 2804 aaeCLIP22.26■■□□□ 1.15
SSU72-201ENST00000291386 ZNF737O75373 536 aa22.25■■□□□ 1.15
SSU72-201ENST00000291386 HAND1O96004 215 aa22.25■■□□□ 1.15
SSU72-201ENST00000291386 GALP22466 123 aa22.25■■□□□ 1.15
SSU72-201ENST00000291386 FGF12P61328 243 aa22.25■■□□□ 1.15
SSU72-201ENST00000291386 COL10A1Q03692 680 aa22.25■■□□□ 1.15
SSU72-201ENST00000291386 SYT6Q5T7P8 510 aaPredicted RBP22.25■■□□□ 1.15
SSU72-201ENST00000291386 LRRTM1Q86UE6 522 aa22.25■■□□□ 1.15
SSU72-201ENST00000291386 TMEM185AQ8NFB2 350 aa22.25■■□□□ 1.15
SSU72-201ENST00000291386 GLS2Q9UI32 602 aa22.25■■□□□ 1.15
SSU72-201ENST00000291386 K7N7A8 449 aa22.24■■□□□ 1.15
SSU72-201ENST00000291386 ARL6IP5O75915 188 aa22.24■■□□□ 1.15
SSU72-201ENST00000291386 CD37P11049 281 aa22.24■■□□□ 1.15
SSU72-201ENST00000291386 ADRA2CP18825 462 aa22.24■■□□□ 1.15
SSU72-201ENST00000291386 PSMB9P28065 219 aa22.24■■□□□ 1.15
SSU72-201ENST00000291386 IL17RELQ6ZVW7 336 aa22.24■■□□□ 1.15
SSU72-201ENST00000291386 OR51T1Q8NGJ9 327 aa22.24■■□□□ 1.15
SSU72-201ENST00000291386 FOXRED1Q96CU9 486 aaPredicted RBP22.24■■□□□ 1.15
SSU72-201ENST00000291386 UQCC2Q9BRT2 126 aa22.24■■□□□ 1.15
SSU72-201ENST00000291386 FAM192AQ9GZU8 254 aa22.24■■□□□ 1.15
SSU72-201ENST00000291386 METTL9Q9H1A3 318 aa22.24■■□□□ 1.15
SSU72-201ENST00000291386 ZNF696Q9H7X3 374 aa22.24■■□□□ 1.15
SSU72-201ENST00000291386 ZFHX3Q15911 3703 aa22.24■■□□□ 1.15
SSU72-201ENST00000291386 SVEP1Q4LDE5 3571 aa22.24■■□□□ 1.15
SSU72-201ENST00000291386 ZNF780AO75290 641 aaPredicted RBP22.23■■□□□ 1.15
SSU72-201ENST00000291386 TK1P04183 234 aa22.23■■□□□ 1.15
SSU72-201ENST00000291386 FAM157CP0CG43 387 aa22.23■■□□□ 1.15
SSU72-201ENST00000291386 NDUFB7P17568 137 aa22.23■■□□□ 1.15
SSU72-201ENST00000291386 LMO1P25800 156 aa22.23■■□□□ 1.15
SSU72-201ENST00000291386 RSU1Q15404 277 aa22.23■■□□□ 1.15
SSU72-201ENST00000291386 JAGN1Q8N5M9 183 aa22.23■■□□□ 1.15
SSU72-201ENST00000291386 SNX22Q96L94 193 aa22.23■■□□□ 1.15
SSU72-201ENST00000291386 NKX3-1Q99801 234 aaPredicted RBP22.23■■□□□ 1.15
SSU72-201ENST00000291386 CNTD2Q9H8S5 307 aa22.23■■□□□ 1.15
SSU72-201ENST00000291386 GSTK1Q9Y2Q3 226 aa22.23■■□□□ 1.15
SSU72-201ENST00000291386 A0A087WXM4 84 aa22.22■■□□□ 1.15
SSU72-201ENST00000291386 TRBV23-1A0A0A0MS06 115 aa22.22■■□□□ 1.15
SSU72-201ENST00000291386 TRDV1A0A1B0GX56 115 aa22.22■■□□□ 1.15
SSU72-201ENST00000291386 SH2D1BO14796 132 aa22.22■■□□□ 1.15
SSU72-201ENST00000291386 RIPPLY3P57055 190 aa22.22■■□□□ 1.15
SSU72-201ENST00000291386 TSPAN14Q8NG11 270 aa22.22■■□□□ 1.15
SSU72-201ENST00000291386 S100A13Q99584 98 aa22.22■■□□□ 1.15
SSU72-201ENST00000291386 SLITRK2Q9H156 845 aa22.22■■□□□ 1.15
SSU72-201ENST00000291386 EXOSC4Q9NPD3 245 aaKnown RBP22.22■■□□□ 1.15
SSU72-201ENST00000291386 PCDHB16Q9NRJ7 776 aa22.22■■□□□ 1.15
SSU72-201ENST00000291386 ING4Q9UNL4 249 aa22.22■■□□□ 1.15
SSU72-201ENST00000291386 NF1P21359 2839 aa22.22■■□□□ 1.15
SSU72-201ENST00000291386 CDRT1O95170 752 aa22.21■■□□□ 1.15
SSU72-201ENST00000291386 FSHBP01225 129 aa22.21■■□□□ 1.15
SSU72-201ENST00000291386 CALCBP10092 127 aa22.21■■□□□ 1.15
SSU72-201ENST00000291386 SRD5A1P18405 259 aa22.21■■□□□ 1.15
SSU72-201ENST00000291386 CAPZA1P52907 286 aa22.21■■□□□ 1.15
SSU72-201ENST00000291386 NHLRC3Q5JS37 347 aa22.21■■□□□ 1.15
SSU72-201ENST00000291386 GLT8D1Q68CQ7 371 aa22.21■■□□□ 1.15
SSU72-201ENST00000291386 OR5D13Q8NGL4 314 aa22.21■■□□□ 1.15
SSU72-201ENST00000291386 MUL1Q969V5 352 aa22.21■■□□□ 1.15
SSU72-201ENST00000291386 ELL3Q9HB65 397 aaPredicted RBP22.21■■□□□ 1.15
SSU72-201ENST00000291386 NAV3Q8IVL0 2385 aa22.2■■□□□ 1.15
SSU72-201ENST00000291386 TMEM82A0PJX8 343 aa22.2■■□□□ 1.14
SSU72-201ENST00000291386 DUSP1P28562 367 aa22.2■■□□□ 1.14
SSU72-201ENST00000291386 GPR176Q14439 515 aa22.2■■□□□ 1.14
SSU72-201ENST00000291386 IL13RA2Q14627 380 aa22.2■■□□□ 1.14
SSU72-201ENST00000291386 C1orf100Q5SVJ3 147 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms