RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 TNFSF11O14788 317 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 TIMM8AO60220 97 aaPredicted RBP10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 TCTEX1D1Q8N7M0 179 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 KISS1RQ969F8 398 aaPredicted RBP10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 RASL10BQ96S79 203 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 SPOCK3Q9BQ16 436 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 GLRX2Q9NS18 164 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 LSM2Q9Y333 95 aaKnown RBP10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 CCL27Q9Y4X3 112 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 SOX15O60248 233 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 SEMG1P04279 462 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 CCKARP32238 428 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 GZMMP51124 257 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 DLK1P80370 383 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 WDR38Q5JTN6 314 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 SPINK14Q6IE38 97 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 WFDC8Q8IUA0 241 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 KCNK15Q9H427 330 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 KCNIP2Q9NS61 270 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 PITPNC1Q9UKF7 332 aa10.08□□□□□ -0.8
NPC1L1-201ENST00000289547 PCM1Q15154 2024 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 RNF224P0DH78 156 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 SLC25A4P12235 298 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 AGFG1P52594 562 aaKnown RBP10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 NHLH1Q02575 133 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 TIGITQ495A1 244 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 UBL7Q96S82 380 aaPredicted RBP10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 PRR13Q9NZ81 148 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 MTCH1Q9NZJ7 389 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 TMEM8BA6NDV4 472 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 FOXS1O43638 330 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 ONECUT2O95948 504 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 CRYAAP02489 173 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 SPINK2P20155 84 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 USF1P22415 310 aaPredicted RBP10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 ARR3P36575 388 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 UBE2G2P60604 165 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 LSM11P83369 360 aaKnown RBP eCLIP10.07□□□□□ -0.86e-8■□□□□ 8.5
NPC1L1-201ENST00000289547 FOXF1Q12946 379 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 EGLN1Q9GZT9 426 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 SIRT7Q9NRC8 400 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 ZDBF2Q9HCK1 2354 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 CHRNA7P36544 502 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 LIMK1P53667 647 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 ZNF345Q14585 488 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 LTC4SQ16873 150 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 ATRAIDQ6UW56 229 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 OR10A7Q8NGE5 316 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 OR5B3Q8NH48 314 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 C4orf45Q96LM5 186 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 NOL4LQ96MY1 436 aaPredicted RBP10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 OR8B4Q96RC9 309 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 CXorf65A6NEN9 183 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 H3BQ15 152 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 SEMA7AO75326 666 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 VSIG10L2P0DP72 767 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 COX5AP20674 150 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 PABPC1L2AQ5JQF8 200 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 CORO2AQ92828 525 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 FOXJ2Q9P0K8 574 aa10.07□□□□□ -0.8
NPC1L1-201ENST00000289547 KIR2DS1A0A191URI9 304 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 PRSS37A4D1T9 235 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 ALG1L2C9J202 215 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 KCNAB3O43448 404 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 SP1P08047 785 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 SELEP16581 610 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 KIR2DS4P43632 304 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 SCAND1P57086 179 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 KIR2DS1Q14954 304 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 HFEQ30201 348 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 UBE3DQ7Z6J8 389 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 OR52N4Q8NGI2 321 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 TIMD4Q96H15 378 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 PILRAQ9UKJ1 303 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 ATP23Q9Y6H3 246 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 A0A1W2PNR3 127 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 FAM24AA6NFZ4 105 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 FAM90A27PA6NNH2 459 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 ABHD16AO95870 558 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 DHODHQ02127 395 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 FAM219AQ8IW50 185 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 ARHGEF39Q8N4T4 335 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 OR4D11Q8NGI4 311 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 OR5C1Q8NGR4 320 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 C11orf40Q8WZ69 217 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 IGHV1-45A0A0A0MS14 117 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 C1QCP02747 245 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 TIAL1Q01085 375 aaKnown RBP eCLIP10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 OR8G1Q15617 311 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 ABLIM2Q6H8Q1 611 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 SARGQ9BW04 601 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 SLC52A3Q9NQ40 469 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 PAM16Q9Y3D7 125 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 EMDP50402 254 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 SLC25A30Q5SVS4 291 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 TFAP2EQ6VUC0 442 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 GLRX5Q86SX6 157 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 LIPHQ8WWY8 451 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 GPR61Q9BZJ8 451 aa10.06□□□□□ -0.8
NPC1L1-201ENST00000289547 PSENENQ9NZ42 101 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms