RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 RFPL4AL1F8VTS6 287 aa18.25■□□□□ 0.51
PDLIM3-203ENST00000284771 DNASE1P24855 282 aa18.25■□□□□ 0.51
PDLIM3-203ENST00000284771 TMEM33P57088 247 aa18.25■□□□□ 0.51
PDLIM3-203ENST00000284771 SMIM21Q3B7S5 101 aa18.25■□□□□ 0.51
PDLIM3-203ENST00000284771 RTN4RL2Q86UN3 420 aa18.25■□□□□ 0.51
PDLIM3-203ENST00000284771 ABCG5Q9H222 651 aa18.25■□□□□ 0.51
PDLIM3-203ENST00000284771 WIPI2Q9Y4P8 454 aa18.25■□□□□ 0.51
PDLIM3-203ENST00000284771 RAB27BO00194 218 aa18.24■□□□□ 0.51
PDLIM3-203ENST00000284771 TNFRSF13BO14836 293 aaPredicted RBP18.24■□□□□ 0.51
PDLIM3-203ENST00000284771 RGS5O15539 181 aa18.24■□□□□ 0.51
PDLIM3-203ENST00000284771 ART1P52961 327 aa18.24■□□□□ 0.51
PDLIM3-203ENST00000284771 BTG1P62324 171 aa18.24■□□□□ 0.51
PDLIM3-203ENST00000284771 CARTPTQ16568 116 aa18.24■□□□□ 0.51
PDLIM3-203ENST00000284771 MICBQ29980 383 aa18.24■□□□□ 0.51
PDLIM3-203ENST00000284771 AVPI1Q5T686 147 aa18.24■□□□□ 0.51
PDLIM3-203ENST00000284771 CD177Q8N6Q3 437 aa18.24■□□□□ 0.51
PDLIM3-203ENST00000284771 DTX3Q8N9I9 347 aa18.24■□□□□ 0.51
PDLIM3-203ENST00000284771 ANGPTL6Q8NI99 470 aa18.24■□□□□ 0.51
PDLIM3-203ENST00000284771 BEX4Q9NWD9 120 aaPredicted RBP18.24■□□□□ 0.51
PDLIM3-203ENST00000284771 DNAJB11Q9UBS4 358 aa18.24■□□□□ 0.51
PDLIM3-203ENST00000284771 ZNF222Q9UK12 451 aa18.24■□□□□ 0.51
PDLIM3-203ENST00000284771 FOXI3A8MTJ6 420 aaPredicted RBP18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 CLDN25C9JDP6 229 aa18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 LGALS8O00214 317 aa18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 SOCS1O15524 211 aa18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 CLPXO76031 633 aa18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 KNG1P01042 644 aa18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 IGHV2-70P01814 119 aa18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 MUC1P15941 1255 aaPredicted RBP18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 RANBP1P43487 201 aa18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 VEGFCP49767 419 aa18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 TMEM50BP56557 158 aa18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 UBE2NLQ5JXB2 153 aa18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 Q6P435 159 aa18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 DNM1P46Q6ZS02 220 aa18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 MBD6Q96DN6 1003 aa18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 ATG5Q9H1Y0 275 aa18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 OR14J1Q9UGF5 321 aa18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 METRNQ9UJH8 293 aa18.23■□□□□ 0.51
PDLIM3-203ENST00000284771 PPIHO43447 177 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 GYPAP02724 150 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 GABRR1P24046 479 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 SPIN3Q5JUX0 258 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 STUMQ69YW2 141 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 NINJ1Q92982 152 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 CMTM3Q96MX0 182 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 BARX1Q9HBU1 254 aaPredicted RBP18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 EDARQ9UNE0 448 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 A0A1B0GW55 424 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 FSTL3O95633 263 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 APOA1P02647 267 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 DUX4L2P0CJ85 424 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 DUX4L3P0CJ86 424 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 DUX4L4P0CJ87 422 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 DUX4L5P0CJ88 424 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 DUX4L6P0CJ89 424 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 DUX4L7P0CJ90 424 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 PRDX2P32119 198 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 DUX4L9Q6RFH8 374 aaPredicted RBP18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 LRRC28Q86X40 367 aaPredicted RBP18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 OR6Q1Q8NGQ2 317 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 TMEM246Q9BRR3 403 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 URM1Q9BTM9 101 aaKnown RBP18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 DUX4Q9UBX2 424 aa18.22■□□□□ 0.51
PDLIM3-203ENST00000284771 TRAV38-1A0A0B4J264 116 aa18.21■□□□□ 0.51
PDLIM3-203ENST00000284771 OR7C1O76099 320 aaPredicted RBP18.21■□□□□ 0.51
PDLIM3-203ENST00000284771 OR2H2O95918 312 aa18.21■□□□□ 0.51
PDLIM3-203ENST00000284771 HAND1O96004 215 aa18.21■□□□□ 0.51
PDLIM3-203ENST00000284771 CPT2P23786 658 aa18.21■□□□□ 0.51
PDLIM3-203ENST00000284771 GIFP27352 417 aa18.21■□□□□ 0.51
PDLIM3-203ENST00000284771 TNFSF8P32971 234 aa18.21■□□□□ 0.51
PDLIM3-203ENST00000284771 SCN1BQ07699 218 aa18.21■□□□□ 0.51
PDLIM3-203ENST00000284771 IL13RA2Q14627 380 aa18.21■□□□□ 0.51
PDLIM3-203ENST00000284771 PLAC9Q5JTB6 97 aa18.21■□□□□ 0.51
PDLIM3-203ENST00000284771 BRICD5Q6PL45 260 aa18.21■□□□□ 0.51
PDLIM3-203ENST00000284771 MYOZ1Q9NP98 299 aaPredicted RBP18.21■□□□□ 0.51
PDLIM3-203ENST00000284771 MAB21L2Q9Y586 359 aa18.21■□□□□ 0.51
PDLIM3-203ENST00000284771 TRAV24A0A0B4J272 114 aa18.2■□□□□ 0.5
PDLIM3-203ENST00000284771 CDK2P24941 298 aa18.2■□□□□ 0.5
PDLIM3-203ENST00000284771 PITPNBP48739 271 aa18.2■□□□□ 0.5
PDLIM3-203ENST00000284771 IKZF1Q13422 519 aa18.2■□□□□ 0.5
PDLIM3-203ENST00000284771 LYPD2Q6UXB3 125 aa18.2■□□□□ 0.5
PDLIM3-203ENST00000284771 LRRC75A-AS1Q8N1F1 130 aa18.2■□□□□ 0.5
PDLIM3-203ENST00000284771 RAB40AQ8WXH6 277 aa18.2■□□□□ 0.5
PDLIM3-203ENST00000284771 CCL13Q99616 98 aa18.2■□□□□ 0.5
PDLIM3-203ENST00000284771 BPESC1Q9GZL8 116 aa18.2■□□□□ 0.5
PDLIM3-203ENST00000284771 CCDC168Q8NDH2 2452 aa18.2■□□□□ 0.5
PDLIM3-203ENST00000284771 METTL21EPA6NDL7 271 aa18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 PSPNO60542 156 aa18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 FCN3O75636 299 aa18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 LMO1P25800 156 aa18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 BLVRBP30043 206 aaPredicted RBP18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 MDH2P40926 338 aaKnown RBP18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 PDLIM4P50479 330 aa18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 MADCAM1Q13477 382 aa18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 ATPAF1Q5TC12 328 aaPredicted RBP18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 ZNF788Q6ZQV5 615 aa18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 PEG10Q86TG7 708 aaKnown RBP18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 C10orf105Q8TEF2 133 aa18.19■□□□□ 0.5
PDLIM3-203ENST00000284771 FAM168AQ92567 244 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms