RNA–Protein interactions for RNA: ENST00000274963.12

FGD2-201, Transcript of FYVE, RhoGEF and PH domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD2, Length 3,046 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD2-201ENST00000274963 HAAOP46952 286 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 MEX3BQ6ZN04 569 aaKnown RBP13.05□□□□□ -0.32
FGD2-201ENST00000274963 SLAMF9Q96A28 289 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 DEFB127Q9H1M4 99 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 DUX4Q9UBX2 424 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 CEP250Q9BV73 2442 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 OR5AC1P0C628 307 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 POLR2GP62487 172 aaKnown RBP eCLIP13.05□□□□□ -0.32
FGD2-201ENST00000274963 TMEM164Q5U3C3 297 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 hCG_38984A0A1B0GV85 526 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 CYTIPO60759 359 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 ZNF728P0DKX0 622 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 NME2P22392 152 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 ID4P47928 161 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 PCBD1P61457 104 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 TGIF1Q15583 401 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 PLEKHN1Q494U1 663 aaPredicted RBP13.05□□□□□ -0.32
FGD2-201ENST00000274963 ABLIM2Q6H8Q1 611 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 PRSS54Q6PEW0 395 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 TMEM88Q6PEY1 159 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 LYZL2Q7Z4W2 148 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 IL22RA1Q8N6P7 574 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 RTN4IP1Q8WWV3 396 aaPredicted RBP13.05□□□□□ -0.32
FGD2-201ENST00000274963 MED9Q9NWA0 146 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 C1orf123Q9NWV4 160 aa13.05□□□□□ -0.32
FGD2-201ENST00000274963 PCSK5Q92824 1860 aa13.04□□□□□ -0.32
FGD2-201ENST00000274963 A0A1W2PR80 420 aa13.04□□□□□ -0.32
FGD2-201ENST00000274963 CHATP28329 748 aa13.04□□□□□ -0.32
FGD2-201ENST00000274963 ASCL1P50553 236 aa13.04□□□□□ -0.32
FGD2-201ENST00000274963 DCAF10Q5QP82 559 aa13.04□□□□□ -0.32
FGD2-201ENST00000274963 SPATA46Q5T0L3 261 aa13.04□□□□□ -0.32
FGD2-201ENST00000274963 GGNBP1Q5YKI7 109 aa13.04□□□□□ -0.32
FGD2-201ENST00000274963 LHFPL2Q6ZUX7 228 aa13.04□□□□□ -0.32
FGD2-201ENST00000274963 ZNF488Q96MN9 340 aa13.04□□□□□ -0.32
FGD2-201ENST00000274963 TTTY12Q9BZ98 90 aa13.04□□□□□ -0.32
FGD2-201ENST00000274963 CYTL1Q9NRR1 136 aa13.04□□□□□ -0.32
FGD2-201ENST00000274963 FAM96BQ9Y3D0 163 aa13.04□□□□□ -0.32
FGD2-201ENST00000274963 MED19A0JLT2 244 aaPredicted RBP13.04□□□□□ -0.32
FGD2-201ENST00000274963 MALLQ13021 153 aa13.04□□□□□ -0.32
FGD2-201ENST00000274963 ZNF600Q6ZNG1 722 aa13.04□□□□□ -0.32
FGD2-201ENST00000274963 TMPRSS7Q7RTY8 843 aa13.04□□□□□ -0.32
FGD2-201ENST00000274963 TREM1Q9NP99 234 aa13.04□□□□□ -0.32
FGD2-201ENST00000274963 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.04□□□□□ -0.32
FGD2-201ENST00000274963 NECAP2Q9NVZ3 263 aa13.04□□□□□ -0.32
FGD2-201ENST00000274963 RIF1Q5UIP0 2472 aaKnown RBP13.03□□□□□ -0.32
FGD2-201ENST00000274963 FAM74A7A6NL05 159 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 GPR31O00270 319 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 LRP3O75074 770 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 FUT6P51993 359 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 FAM74A3Q4VXF1 159 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 POC1AQ8NBT0 407 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 FAM173AQ9BQD7 235 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 FAM117AQ9C073 453 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 BCO1Q9HAY6 547 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 PARPBPQ9NWS1 579 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 ZNF816-ZNF321PA0A0X1KG74 233 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 DNPH1O43598 174 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 SYNGR4O95473 234 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 ACTL6AO96019 429 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 IFNA21P01568 189 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 MMP7P09237 267 aaPredicted RBP13.03□□□□□ -0.32
FGD2-201ENST00000274963 LHX2P50458 406 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 RAB1AP62820 205 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 AKIRIN2Q53H80 203 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 SPIN3Q5JUX0 258 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 TMEM251Q8N6I4 163 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 NTNG2Q96CW9 530 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 ZNF703Q9H7S9 590 aaPredicted RBP13.03□□□□□ -0.32
FGD2-201ENST00000274963 STARD10Q9Y365 291 aa13.03□□□□□ -0.32
FGD2-201ENST00000274963 CEACAM18A8MTB9 384 aa13.02□□□□□ -0.32
FGD2-201ENST00000274963 TNFSF15O95150 251 aa13.02□□□□□ -0.32
FGD2-201ENST00000274963 NXPH3O95157 252 aa13.02□□□□□ -0.32
FGD2-201ENST00000274963 BCL3P20749 454 aa13.02□□□□□ -0.32
FGD2-201ENST00000274963 ARL6IP1Q15041 203 aa13.02□□□□□ -0.32
FGD2-201ENST00000274963 PDSS1Q5T2R2 415 aa13.02□□□□□ -0.32
FGD2-201ENST00000274963 H3F3CQ6NXT2 135 aa13.02□□□□□ -0.32
FGD2-201ENST00000274963 ZNF100Q8IYN0 542 aa13.02□□□□□ -0.32
FGD2-201ENST00000274963 LILRB2Q8N423 598 aa13.02□□□□□ -0.32
FGD2-201ENST00000274963 SUMF1Q8NBK3 374 aa13.02□□□□□ -0.32
FGD2-201ENST00000274963 C10orf35Q96D05 121 aa13.02□□□□□ -0.32
FGD2-201ENST00000274963 A0A1B0GV50 99 aa13.02□□□□□ -0.33
FGD2-201ENST00000274963 ZNF98A6NK75 572 aa13.02□□□□□ -0.33
FGD2-201ENST00000274963 ZNF708P17019 499 aa13.02□□□□□ -0.33
FGD2-201ENST00000274963 HIKESHIQ53FT3 197 aa13.02□□□□□ -0.33
FGD2-201ENST00000274963 MRPL21Q7Z2W9 205 aaKnown RBP13.02□□□□□ -0.33
FGD2-201ENST00000274963 MCEMP1Q8IX19 187 aa13.02□□□□□ -0.33
FGD2-201ENST00000274963 TSNAXQ99598 290 aaKnown RBP13.02□□□□□ -0.33
FGD2-201ENST00000274963 LDAHQ9H6V9 325 aa13.02□□□□□ -0.33
FGD2-201ENST00000274963 B4GALT7Q9UBV7 327 aa13.02□□□□□ -0.33
FGD2-201ENST00000274963 KCNIP3Q9Y2W7 256 aa13.02□□□□□ -0.33
FGD2-201ENST00000274963 TNRC6BQ9UPQ9 1833 aaKnown RBP13.02□□□□□ -0.33
FGD2-201ENST00000274963 LINC01387J3KSC0 135 aa13.02□□□□□ -0.33
FGD2-201ENST00000274963 K7EPK0 472 aa13.02□□□□□ -0.33
FGD2-201ENST00000274963 ABCD4O14678 606 aa13.02□□□□□ -0.33
FGD2-201ENST00000274963 PHF1O43189 567 aaPredicted RBP13.02□□□□□ -0.33
FGD2-201ENST00000274963 RPL12P30050 165 aaKnown RBP13.02□□□□□ -0.33
FGD2-201ENST00000274963 CLDN18P56856 261 aa13.02□□□□□ -0.33
FGD2-201ENST00000274963 SPEM2Q0P670 501 aa13.02□□□□□ -0.33
FGD2-201ENST00000274963 TSC22D1Q15714 1073 aa13.02□□□□□ -0.33
FGD2-201ENST00000274963 Q6ZPA2 131 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms