RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 KHDC3LQ587J8 217 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 SPIN3Q5JUX0 258 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 SDHAF3Q9NRP4 125 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 NOSIPQ9Y314 301 aaKnown RBP11.25□□□□□ -0.61
COL8A1-202ENST00000273342 PRRC2CQ9Y520 2896 aaKnown RBP11.25□□□□□ -0.61
COL8A1-202ENST00000273342 ANKUB1A6NFN9 424 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 GEMIN2O14893 280 aaKnown RBP11.25□□□□□ -0.61
COL8A1-202ENST00000273342 PPP1R2P9O14990 202 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 PATE4P0C8F1 98 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 PLA2G5P39877 138 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 BLKP51451 505 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 NKX6-1P78426 367 aaPredicted RBP11.25□□□□□ -0.61
COL8A1-202ENST00000273342 PPA1Q15181 289 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 TMEM131Q92545 1883 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 TP53RKQ96S44 253 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 METTL7AQ9H8H3 244 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 GFOD1Q9NXC2 390 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 ALKBH4Q9NXW9 302 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 TRAF3IP2O43734 574 aaPredicted RBP11.25□□□□□ -0.61
COL8A1-202ENST00000273342 NDUFB7P17568 137 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 SNAI3Q3KNW1 292 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 CXorf66Q5JRM2 361 aaPredicted RBP11.25□□□□□ -0.61
COL8A1-202ENST00000273342 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.25□□□□□ -0.61
COL8A1-202ENST00000273342 OR10G3Q8NGC4 313 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 TMEM171Q8WVE6 324 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 PRDM13Q9H4Q3 707 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 CRLF2Q9HC73 371 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 PLEK2Q9NYT0 353 aa11.25□□□□□ -0.61
COL8A1-202ENST00000273342 ZNF407Q9C0G0 2248 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 IGSF23A1L1A6 192 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 G3V3Y1 287 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 POU2F2P09086 479 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 DUSP1P28562 367 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 PMELP40967 661 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 KIAA0895LQ68EN5 471 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 OR5C1Q8NGR4 320 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 ZNF837Q96EG3 531 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-202ENST00000273342 TRBV11-1A0A0K0K1C0 115 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 K7N7A8 449 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 HSPB6O14558 160 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 F10P00742 488 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 EPHA1P21709 976 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 PHYHD1Q5SRE7 291 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 OR2C3Q8N628 320 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 ST8SIA1Q92185 356 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 SNX22Q96L94 193 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 NECAP2Q9NVZ3 263 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 WSB1Q9Y6I7 421 aa11.24□□□□□ -0.61
COL8A1-202ENST00000273342 ZFP92A6NM28 416 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 FOXI3A8MTJ6 420 aaPredicted RBP11.23□□□□□ -0.61
COL8A1-202ENST00000273342 HSD17B6O14756 317 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 OR2J2O76002 312 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 RAB1AP62820 205 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 COL13A1Q5TAT6 717 aaPredicted RBP11.23□□□□□ -0.61
COL8A1-202ENST00000273342 LIAT1Q6ZQX7 453 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 COMMD1Q8N668 190 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 FRZBQ92765 325 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 NAT6Q93015 286 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 MALSU1Q96EH3 234 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 ARV1Q9H2C2 271 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 MOB1AQ9H8S9 216 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 FER1L5A0AVI2 2057 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 SHISA7A6NL88 538 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 TRGC1P0CF51 173 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 FOSL2P15408 326 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 RAB11AP62491 216 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 RPL23AP62750 156 aaKnown RBP11.23□□□□□ -0.61
COL8A1-202ENST00000273342 USF2Q15853 346 aaPredicted RBP11.23□□□□□ -0.61
COL8A1-202ENST00000273342 ZNF880Q6PDB4 577 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 SPSB3Q6PJ21 355 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 POC1BQ8TC44 478 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 FBRSQ9HAH7 460 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 CLEC1BQ9P126 229 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 GNG13Q9P2W3 67 aa11.23□□□□□ -0.61
COL8A1-202ENST00000273342 STRAPQ9Y3F4 350 aaKnown RBP11.23□□□□□ -0.61
COL8A1-202ENST00000273342 ZNF587BE7ETH6 402 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 PHOX2AO14813 284 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 HLA-HP01893 362 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 SELLP14151 372 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 MMP9P14780 707 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 FBXL14Q8N1E6 418 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 ZNF441Q8N8Z8 693 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 HAS2Q92819 552 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 ZDHHC12Q96GR4 267 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 POM121Q96HA1 1249 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 UFSP2Q9NUQ7 469 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 P4HTMQ9NXG6 502 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 DIDO1Q9BTC0 2240 aaKnown RBP11.22□□□□□ -0.61
COL8A1-202ENST00000273342 DHRS3O75911 302 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 SRP19P09132 144 aaKnown RBP11.22□□□□□ -0.61
COL8A1-202ENST00000273342 FASLGP48023 281 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 UCP2P55851 309 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 ZNF154Q13106 437 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 FAM189A2Q15884 450 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 IZUMO4Q1ZYL8 232 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 NKAIN1Q4KMZ8 207 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 SLC25A47Q6Q0C1 308 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 OR14L1PQ8NHC6 308 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 SSC4DQ8WTU2 575 aa11.22□□□□□ -0.61
COL8A1-202ENST00000273342 MSI2Q96DH6 328 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms