RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 MITD1Q8WV92 249 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 ST8SIA2Q92186 375 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 PDCD10Q9BUL8 212 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 C1QTNF6Q9BXI9 259 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 TNFSF18Q9UNG2 199 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 SPENQ96T58 3664 aaKnown RBP13.16□□□□□ -0.3
SF3B4-201ENST00000271628 KANTRA0A1W2PQU2 76 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 PRSS44E7EML9 344 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 GFRA3O60609 400 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 PMP2P02689 132 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 RLN2P04090 185 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 CBR1P16152 277 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 TAS2R46P59540 309 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 FOXF2Q12947 444 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 P2RY6Q15077 328 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 FBXW12Q6X9E4 464 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 BEND4Q6ZU67 534 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 C6orf201Q7Z4U5 140 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 TMEM17Q86X19 198 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 SPACA3Q8IXA5 215 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 C17orf78Q8N4C9 275 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 PHB2Q99623 299 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 ST6GALNAC5Q9BVH7 336 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 ZNF230Q9UIE0 474 aaPredicted RBP13.16□□□□□ -0.3
SF3B4-201ENST00000271628 EDARQ9UNE0 448 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 ST3GAL6Q9Y274 331 aa13.16□□□□□ -0.3
SF3B4-201ENST00000271628 TNFSF13O75888 250 aa13.15□□□□□ -0.3
SF3B4-201ENST00000271628 AMY2BP19961 511 aa13.15□□□□□ -0.3
SF3B4-201ENST00000271628 IDH3GP51553 393 aaPredicted RBP13.15□□□□□ -0.3
SF3B4-201ENST00000271628 SNU13P55769 128 aaKnown RBP13.15□□□□□ -0.3
SF3B4-201ENST00000271628 MICBQ29980 383 aa13.15□□□□□ -0.3
SF3B4-201ENST00000271628 FAM180AQ6UWF9 173 aa13.15□□□□□ -0.3
SF3B4-201ENST00000271628 UNQ6126/PRO20091Q6UXV3 157 aa13.15□□□□□ -0.3
SF3B4-201ENST00000271628 SLC25A26Q70HW3 274 aa13.15□□□□□ -0.3
SF3B4-201ENST00000271628 TMEM200AQ86VY9 491 aa13.15□□□□□ -0.3
SF3B4-201ENST00000271628 MKXQ8IYA7 352 aa13.15□□□□□ -0.3
SF3B4-201ENST00000271628 OR5H2Q8NGV7 314 aa13.15□□□□□ -0.3
SF3B4-201ENST00000271628 TERB2Q8NHR7 220 aa13.15□□□□□ -0.3
SF3B4-201ENST00000271628 HPSE2Q8WWQ2 592 aa13.15□□□□□ -0.3
SF3B4-201ENST00000271628 STARD4Q96DR4 205 aa13.15□□□□□ -0.3
SF3B4-201ENST00000271628 PHYHIPLQ96FC7 376 aa13.15□□□□□ -0.3
SF3B4-201ENST00000271628 ABHD17AQ96GS6 310 aa13.15□□□□□ -0.3
SF3B4-201ENST00000271628 OBP2BQ9NPH6 170 aa13.15□□□□□ -0.3
SF3B4-201ENST00000271628 CACNA1GO43497 2377 aa13.15□□□□□ -0.31
SF3B4-201ENST00000271628 C9orf170A2RU37 121 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 K7EM74 188 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 CGAP01215 116 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 IGKV3-15P01624 115 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 SFTPBP07988 381 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 IL32P24001 234 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 HAAOP46952 286 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 GPM6AP51674 278 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 IL13RA1P78552 427 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 NKAPLQ5M9Q1 402 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 ACOT7LQ6ZUV0 252 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 FBXL14Q8N1E6 418 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 OR5AP2Q8NGF4 316 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 LHFPL5Q8TAF8 219 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 EMG1Q92979 244 aaKnown RBP13.14□□□□□ -0.31
SF3B4-201ENST00000271628 RASL12Q9NYN1 266 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 MSRB2Q9Y3D2 182 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 FAM90A10PA6NDY2 464 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 FAM90A18PA6NE21 464 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 FAM90A16PA6NEW6 464 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 FAM90A20PA6NIJ5 464 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 FAM90A8PA6NJQ4 464 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 FAM90A7PA6NKC0 464 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 OR5B21A6NL26 309 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 FAM90A22PA8MWA6 464 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 FAM90A12PA8MX19 464 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 FAM90A5PA8MXJ8 464 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 FAM90A23PA8MXZ1 464 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 ZNF732B4DXR9 585 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 GEMIN2O14893 280 aaKnown RBP13.14□□□□□ -0.31
SF3B4-201ENST00000271628 TPD52L2O43399 206 aaKnown RBP13.14□□□□□ -0.31
SF3B4-201ENST00000271628 SMPD2O60906 423 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 FAM90A15PP0C7V4 464 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 FAM90A13PP0C7W8 464 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 FAM90A14PP0C7W9 464 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 FAM90A24PP0C7X0 464 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 PMELP40967 661 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 PPP1R1AQ13522 171 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 ELP2Q6IA86 826 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 C17orf107Q6ZR85 190 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 ZNF610Q8N9Z0 462 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 PPP1R1CQ8WVI7 109 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 OR5P3Q8WZ94 311 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 MRGPRFQ96AM1 343 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 SCGB3A2Q96PL1 93 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 DMRTA2Q96SC8 542 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 ZNF71Q9NQZ8 489 aaPredicted RBP13.14□□□□□ -0.31
SF3B4-201ENST00000271628 COQ3Q9NZJ6 369 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 WASF3Q9UPY6 502 aa13.14□□□□□ -0.31
SF3B4-201ENST00000271628 GTF3C1Q12789 2109 aa13.13□□□□□ -0.31
SF3B4-201ENST00000271628 A0A1W2PR80 420 aa13.13□□□□□ -0.31
SF3B4-201ENST00000271628 K7ENP7 123 aa13.13□□□□□ -0.31
SF3B4-201ENST00000271628 BCL2L11O43521 198 aa13.13□□□□□ -0.31
SF3B4-201ENST00000271628 DUS4LO95620 317 aaKnown RBP13.13□□□□□ -0.31
SF3B4-201ENST00000271628 TUBG1P23258 451 aa13.13□□□□□ -0.31
SF3B4-201ENST00000271628 CHATP28329 748 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms