RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 G0S2P27469 103 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 SURF2Q15527 256 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 NCR3LG1Q68D85 454 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 OR8G2PQ6IF36 304 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 PP6455Q8WZ26 134 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 AMELYQ99218 206 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 ANKRD10Q9NXR5 420 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 KCNK7Q9Y2U2 307 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 ZIC2O95409 532 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 SSPNQ14714 243 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 C6orf201Q7Z4U5 140 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 OR2C3Q8N628 320 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 M1APQ8TC57 530 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 MRGPRX4Q96LA9 322 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 OR14J1Q9UGF5 321 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 TMED3Q9Y3Q3 217 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 PCNTO95613 3336 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 PTPRQQ9UMZ3 2332 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 KIR2DS1A0A191URI9 304 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 MDFIC2A0A1B0GVS7 189 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 LINC00587B1AMM8 73 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 ACTL6AO96019 429 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 OR5AC1P0C628 307 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 KIR2DS4P43632 304 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 IL13RA2Q14627 380 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 KIR2DS1Q14954 304 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 Q3ZCU0 254 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 MEGF10Q96KG7 1140 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 TMEM100Q9NV29 134 aa10.17□□□□□ -0.78
CLSTN3-201ENST00000266546 DOCK9Q9BZ29 2069 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 ARGFXA6NJG6 315 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 IGKV1D-16P01601 117 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 BAXQ07812 192 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 LINC01590Q5TEZ4 76 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 ZNF66Q6ZN08 573 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 BAGE3Q86Y29 109 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 BAGE2Q86Y30 109 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 ZNF321PQ8N8H1 164 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 HINT2Q9BX68 163 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 PLEKHA3Q9HB20 300 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 MYOTQ9UBF9 498 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 CARHSP1Q9Y2V2 147 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 ELOA3CA0A087WX78 387 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 FAM24AA6NFZ4 105 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 PLPP3O14495 311 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 GALR2O43603 387 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 ONECUT2O95948 504 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 SEC11BP0C7V7 166 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 LPAR6P43657 344 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 OR5C1Q8NGR4 320 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 LIN37Q96GY3 246 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 NAA60Q9H7X0 242 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 LIPGQ9Y5X9 500 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 AUP1Q9Y679 476 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 IGKV3D-11A0A0A0MRZ8 115 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 RER1O15258 196 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 EIF1BO60739 113 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 OR2J2O76002 312 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 SHBQ15464 509 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 PDLIM3Q53GG5 364 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 ZSCAN4Q8NAM6 433 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 OR13D1Q8NGV5 346 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 ROBO4Q8WZ75 1007 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 HIST1H2BAQ96A08 127 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 AP1S3Q96PC3 154 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 GPX7Q96SL4 187 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 GPR87Q9BY21 358 aa10.16□□□□□ -0.78
CLSTN3-201ENST00000266546 TRAV14DV4A0A0A6YYC5 116 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 CDRT15L2A8MXV6 281 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 FTCDNL1E5RQL4 147 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 E9PQ18 207 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 J3QRE1 110 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 MBP02144 154 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 CD79AP11912 226 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 POLR2GP62487 172 aaKnown RBP eCLIP10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 TRIP6Q15654 476 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 DEFB109BQ30KR1 87 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 DHRS11Q6UWP2 260 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 AAED1Q7RTV5 226 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 MRPL24Q96A35 216 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 INTS12Q96CB8 462 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 OR51I2Q9H344 312 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 GCM1Q9NP62 436 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 GSN-AS1Q9NRJ2 163 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 ST3GAL6Q9Y274 331 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 TP53BP1Q12888 1972 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 ANKRD30BLA7E2S9 258 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 PNPP00491 289 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 CTSDP07339 412 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 GDF1P27539 372 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 THBS4P35443 961 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 CD200P41217 278 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 HLA-DRB3P79483 266 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 FOXF1Q12946 379 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 ZNF260Q3ZCT1 412 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 ZADH2Q8N4Q0 377 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 UTP23Q9BRU9 249 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 DDA1Q9BW61 102 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 SLC26A1Q9H2B4 701 aa10.15□□□□□ -0.78
CLSTN3-201ENST00000266546 ARV1Q9H2C2 271 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms