RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 GPR37O15354 613 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 SIGLEC5O15389 551 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 ZNF737O75373 536 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 FCN3O75636 299 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 CLEC2LP0C7M8 214 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 VSIG8P0DPA2 414 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 GTF2F2P13984 249 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 PRDX2P32119 198 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 VBP1P61758 197 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 PAX5Q02548 391 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 RSU1Q15404 277 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 CARTPTQ16568 116 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 AVPI1Q5T686 147 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 SFRP4Q6FHJ7 346 aaPredicted RBP11.89□□□□□ -0.51
SSBP1-201ENST00000265304 Q6P435 159 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 SFXN4Q6P4A7 337 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 LINC00596Q86U02 117 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 CLVS1Q8IUQ0 354 aaPredicted RBP11.89□□□□□ -0.51
SSBP1-201ENST00000265304 CD177Q8N6Q3 437 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 DACT3Q96B18 629 aaPredicted RBP11.89□□□□□ -0.51
SSBP1-201ENST00000265304 FAM3DQ96BQ1 224 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 MED30Q96HR3 178 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 COX4I2Q96KJ9 171 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 NKX3-1Q99801 234 aaPredicted RBP11.89□□□□□ -0.51
SSBP1-201ENST00000265304 TM2D1Q9BX74 207 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 FAM234AQ9H0X4 552 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 MAB21L2Q9Y586 359 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 NSD1Q96L73 2696 aaPredicted RBP11.89□□□□□ -0.51
SSBP1-201ENST00000265304 NAV3Q8IVL0 2385 aa11.89□□□□□ -0.51
SSBP1-201ENST00000265304 PPIAL4CA0A0B4J2A2 164 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 SMIM31A0A1B0GVY4 71 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 RFPL4AA6NLU0 287 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 RFPL4AL1F8VTS6 287 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 ZNF205O95201 554 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 PLATP00750 562 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 CHRM2P08172 466 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 CALCBP10092 127 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 FOSL1P15407 271 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 TGFBR1P36897 503 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 NPY4RP50391 375 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 UNC119Q13432 240 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 RAB11BQ15907 218 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 C2orf76Q3KRA6 126 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 AWAT2Q6E213 333 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 LYPD2Q6UXB3 125 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 USP43Q70EL4 1123 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 OSR2Q8N2R0 312 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 ZNF561Q8N587 486 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 CHST4Q8NCG5 386 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 TMEM104Q8NE00 496 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 DEFB108BQ8NET1 73 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 EMG1Q92979 244 aaKnown RBP11.88□□□□□ -0.51
SSBP1-201ENST00000265304 ISOC1Q96CN7 298 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 KCTD12Q96CX2 325 aaKnown RBP11.88□□□□□ -0.51
SSBP1-201ENST00000265304 RAB39BQ96DA2 213 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 NEIL1Q96FI4 390 aaPredicted RBP11.88□□□□□ -0.51
SSBP1-201ENST00000265304 Q96M66 194 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 GAFA1Q96PS6 74 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 S100A13Q99584 98 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 TMUB1Q9BVT8 246 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 CST11Q9H112 138 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 ZNF665Q9H7R5 613 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 PLGRKTQ9HBL7 147 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 DNAJB11Q9UBS4 358 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 ING4Q9UNL4 249 aa11.88□□□□□ -0.51
SSBP1-201ENST00000265304 IGHV3OR15-7A0A075B7D8 119 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 A0A1W2PP11 408 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 FOXI3A8MTJ6 420 aaPredicted RBP11.87□□□□□ -0.51
SSBP1-201ENST00000265304 H3BMQ9 156 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 H3BUI4 141 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 K7N7A8 449 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 GYPAP02724 150 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 GLAP06280 429 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 ARSBP15848 533 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 PRKACAP17612 351 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 RAB6AP20340 208 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 CAV3P56539 151 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 RBM11P57052 281 aaKnown RBP11.87□□□□□ -0.51
SSBP1-201ENST00000265304 LSM3P62310 102 aaKnown RBP11.87□□□□□ -0.51
SSBP1-201ENST00000265304 RPS27AP62979 156 aaKnown RBP11.87□□□□□ -0.51
SSBP1-201ENST00000265304 PAX2Q02962 417 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 MPV17LQ2QL34 196 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 SLC22A6Q4U2R8 563 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 FIP1L1Q6UN15 594 aaKnown RBP11.87□□□□□ -0.51
SSBP1-201ENST00000265304 SLC36A1Q7Z2H8 476 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 BOLLQ8N9W6 283 aaKnown RBP11.87□□□□□ -0.51
SSBP1-201ENST00000265304 C19orf18Q8NEA5 215 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 GAL3ST1Q99999 423 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 BARHL1Q9BZE3 327 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 SHARPINQ9H0F6 387 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 DCSTAMPQ9H295 470 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 NCOR1P1Q9H4R4 102 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 RCC2Q9P258 522 aaKnown RBP11.87□□□□□ -0.51
SSBP1-201ENST00000265304 IL36RNQ9UBH0 155 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 CTSZQ9UBR2 303 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 ST3GAL6Q9Y274 331 aa11.87□□□□□ -0.51
SSBP1-201ENST00000265304 TEP1Q99973 2627 aaKnown RBP11.86□□□□□ -0.51
SSBP1-201ENST00000265304 A6NHS1 94 aa11.86□□□□□ -0.51
SSBP1-201ENST00000265304 KIAA1324LA8MWY0 1029 aaPredicted RBP11.86□□□□□ -0.51
SSBP1-201ENST00000265304 RNF223E7ERA6 249 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms