RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 FUT3P21217 361 aa19.38■□□□□ 0.69
SMARCB1-201ENST00000263121 GIFP27352 417 aa19.38■□□□□ 0.69
SMARCB1-201ENST00000263121 FAUP35544 74 aaKnown RBP19.38■□□□□ 0.69
SMARCB1-201ENST00000263121 CBX5P45973 191 aa19.38■□□□□ 0.69
SMARCB1-201ENST00000263121 SNU13P55769 128 aaKnown RBP19.38■□□□□ 0.69
SMARCB1-201ENST00000263121 NKPD1Q17RQ9 610 aa19.38■□□□□ 0.69
SMARCB1-201ENST00000263121 FAAP20Q6NZ36 180 aa19.38■□□□□ 0.69
SMARCB1-201ENST00000263121 STEAP1BQ6NZ63 245 aa19.38■□□□□ 0.69
SMARCB1-201ENST00000263121 FBXW5Q969U6 566 aa19.38■□□□□ 0.69
SMARCB1-201ENST00000263121 FAAP24Q9BTP7 215 aa19.38■□□□□ 0.69
SMARCB1-201ENST00000263121 CACNG6Q9BXT2 260 aa19.38■□□□□ 0.69
SMARCB1-201ENST00000263121 IFT46Q9NQC8 304 aa19.38■□□□□ 0.69
SMARCB1-201ENST00000263121 HIVEP3Q5T1R4 2406 aa19.37■□□□□ 0.69
SMARCB1-201ENST00000263121 ADGRG4Q8IZF6 3080 aa19.37■□□□□ 0.69
SMARCB1-201ENST00000263121 E7EQL1 145 aa19.37■□□□□ 0.69
SMARCB1-201ENST00000263121 PMELP40967 661 aa19.37■□□□□ 0.69
SMARCB1-201ENST00000263121 ZNF81P51508 661 aa19.37■□□□□ 0.69
SMARCB1-201ENST00000263121 CCR6P51684 374 aa19.37■□□□□ 0.69
SMARCB1-201ENST00000263121 WDR82Q6UXN9 313 aa19.37■□□□□ 0.69
SMARCB1-201ENST00000263121 ZNF826PQ6ZT77 177 aa19.37■□□□□ 0.69
SMARCB1-201ENST00000263121 OR4D10Q8NGI6 311 aa19.37■□□□□ 0.69
SMARCB1-201ENST00000263121 UPRTQ96BW1 309 aa19.37■□□□□ 0.69
SMARCB1-201ENST00000263121 HES4Q9HCC6 221 aa19.37■□□□□ 0.69
SMARCB1-201ENST00000263121 DIDO1Q9BTC0 2240 aaKnown RBP19.37■□□□□ 0.69
SMARCB1-201ENST00000263121 SMG1Q96Q15 3661 aaKnown RBP19.37■□□□□ 0.69
SMARCB1-201ENST00000263121 A6NLC8 198 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 ZNF736B4DX44 427 aaPredicted RBP19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 C3orf80F5H4A9 247 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 TPD52L2O43399 206 aaKnown RBP19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 PRB1P04280 392 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 OR4S1Q8NGB4 309 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 MEGF10Q96KG7 1140 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 OR2V2Q96R30 315 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 MARVELD1Q9BSK0 173 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 COPZ2Q9P299 210 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 AK3Q9UIJ7 227 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 RNF115Q9Y4L5 304 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 VSTM5A8MXK1 200 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 DEFB108AA8MXU0 73 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 SPRY3O43610 288 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 LOXP28300 417 aaPredicted RBP19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 SNAPC3Q92966 411 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 IFT22Q9H7X7 185 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 UFSP2Q9NUQ7 469 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 MCUBQ9NWR8 336 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 ZDHHC8Q9ULC8 765 aa19.36■□□□□ 0.69
SMARCB1-201ENST00000263121 FUOMA2VDF0 154 aa19.35■□□□□ 0.69
SMARCB1-201ENST00000263121 NXPH2O95156 264 aa19.35■□□□□ 0.69
SMARCB1-201ENST00000263121 IGHV1-46P01743 117 aa19.35■□□□□ 0.69
SMARCB1-201ENST00000263121 TCRBP04435 133 aa19.35■□□□□ 0.69
SMARCB1-201ENST00000263121 HLA-DMAP28067 261 aa19.35■□□□□ 0.69
SMARCB1-201ENST00000263121 DUSP1P28562 367 aa19.35■□□□□ 0.69
SMARCB1-201ENST00000263121 IKZF1Q13422 519 aa19.35■□□□□ 0.69
SMARCB1-201ENST00000263121 ATAD3CQ5T2N8 411 aa19.35■□□□□ 0.69
SMARCB1-201ENST00000263121 SFRP4Q6FHJ7 346 aaPredicted RBP19.35■□□□□ 0.69
SMARCB1-201ENST00000263121 OR52W1Q6IF63 320 aa19.35■□□□□ 0.69
SMARCB1-201ENST00000263121 BRICD5Q6PL45 260 aa19.35■□□□□ 0.69
SMARCB1-201ENST00000263121 NEUROG1Q92886 237 aa19.35■□□□□ 0.69
SMARCB1-201ENST00000263121 CREB3L1Q96BA8 519 aa19.35■□□□□ 0.69
SMARCB1-201ENST00000263121 H3BUI4 141 aa19.34■□□□□ 0.69
SMARCB1-201ENST00000263121 RAB3DO95716 219 aa19.34■□□□□ 0.69
SMARCB1-201ENST00000263121 ADH4P08319 380 aa19.34■□□□□ 0.69
SMARCB1-201ENST00000263121 SERPINF1P36955 418 aa19.34■□□□□ 0.69
SMARCB1-201ENST00000263121 GATA4P43694 442 aa19.34■□□□□ 0.69
SMARCB1-201ENST00000263121 BCAP31P51572 246 aa19.34■□□□□ 0.69
SMARCB1-201ENST00000263121 SPRNQ5BIV9 151 aa19.34■□□□□ 0.69
SMARCB1-201ENST00000263121 HOGA1Q86XE5 327 aa19.34■□□□□ 0.69
SMARCB1-201ENST00000263121 HDHD3Q9BSH5 251 aaPredicted RBP19.34■□□□□ 0.69
SMARCB1-201ENST00000263121 C1orf123Q9NWV4 160 aa19.34■□□□□ 0.69
SMARCB1-201ENST00000263121 NUBP2Q9Y5Y2 271 aa19.34■□□□□ 0.69
SMARCB1-201ENST00000263121 PLCE1Q9P212 2302 aa19.34■□□□□ 0.69
SMARCB1-201ENST00000263121 PLAUP00749 431 aa19.33■□□□□ 0.69
SMARCB1-201ENST00000263121 TBPP20226 339 aa19.33■□□□□ 0.69
SMARCB1-201ENST00000263121 ZNF146Q15072 292 aa19.33■□□□□ 0.69
SMARCB1-201ENST00000263121 Q6P435 159 aa19.33■□□□□ 0.69
SMARCB1-201ENST00000263121 ZNF843Q8N446 348 aa19.33■□□□□ 0.69
SMARCB1-201ENST00000263121 ITLN1Q8WWA0 313 aa19.33■□□□□ 0.69
SMARCB1-201ENST00000263121 CMSS1Q9BQ75 279 aaKnown RBP19.33■□□□□ 0.69
SMARCB1-201ENST00000263121 TMEM204Q9BSN7 226 aa19.33■□□□□ 0.69
SMARCB1-201ENST00000263121 TINAGL1Q9GZM7 467 aaPredicted RBP19.33■□□□□ 0.69
SMARCB1-201ENST00000263121 SPACA1Q9HBV2 294 aa19.33■□□□□ 0.69
SMARCB1-201ENST00000263121 IL19Q9UHD0 177 aa19.33■□□□□ 0.69
SMARCB1-201ENST00000263121 PLEKHA6Q9Y2H5 1048 aa19.33■□□□□ 0.69
SMARCB1-201ENST00000263121 CFAP46Q8IYW2 2715 aa19.33■□□□□ 0.69
SMARCB1-201ENST00000263121 M0QYG6 137 aa19.33■□□□□ 0.68
SMARCB1-201ENST00000263121 DTYMKP23919 212 aa19.33■□□□□ 0.68
SMARCB1-201ENST00000263121 CFHR2P36980 270 aa19.33■□□□□ 0.68
SMARCB1-201ENST00000263121 SPIN3Q5JUX0 258 aa19.33■□□□□ 0.68
SMARCB1-201ENST00000263121 RSBN1Q5VWQ0 802 aaPredicted RBP19.33■□□□□ 0.68
SMARCB1-201ENST00000263121 BTN2A1Q7KYR7 527 aa19.33■□□□□ 0.68
SMARCB1-201ENST00000263121 CADM3Q8N126 398 aa19.33■□□□□ 0.68
SMARCB1-201ENST00000263121 OR10Z1Q8NGY1 313 aa19.33■□□□□ 0.68
SMARCB1-201ENST00000263121 OR56B4Q8NH76 319 aa19.33■□□□□ 0.68
SMARCB1-201ENST00000263121 DYRK2Q92630 601 aa19.33■□□□□ 0.68
SMARCB1-201ENST00000263121 DIRC2Q96SL1 478 aa19.33■□□□□ 0.68
SMARCB1-201ENST00000263121 NUDT15Q9NV35 164 aa19.33■□□□□ 0.68
SMARCB1-201ENST00000263121 UBE2QL1A1L167 161 aa19.32■□□□□ 0.68
SMARCB1-201ENST00000263121 ZNF735P0CB33 412 aa19.32■□□□□ 0.68
SMARCB1-201ENST00000263121 APOBEC3AP31941 199 aaPredicted RBP19.32■□□□□ 0.68
SMARCB1-201ENST00000263121 TNFAIP6P98066 277 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms