RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 HIST2H2BEQ16778 126 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.86□□□□□ -0.19
LMNB1-201ENST00000261366 PRAMEF20Q5VT98 475 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 ZNF429Q86V71 674 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 TMEM123Q8N131 208 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 COMMD1Q8N668 190 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 OIT3Q8WWZ8 545 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 HIST1H2BHQ93079 126 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 HIST1H2BNQ99877 126 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 HIST1H2BMQ99879 126 aa13.86□□□□□ -0.19
LMNB1-201ENST00000261366 RBM24Q9BX46 236 aaKnown RBP13.86□□□□□ -0.19
LMNB1-201ENST00000261366 FOXI3A8MTJ6 420 aaPredicted RBP13.85□□□□□ -0.19
LMNB1-201ENST00000261366 ZNF724A8MTY0 619 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 GUCA1AP43080 201 aaPredicted RBP13.85□□□□□ -0.19
LMNB1-201ENST00000261366 PPA1Q15181 289 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 ELOBQ15370 118 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 OR10G3Q8NGC4 313 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 SMOC1Q9H4F8 434 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 METTL7AQ9H8H3 244 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 TRBV11-1A0A0K0K1C0 115 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 NKX2-6A6NCS4 301 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 K7N7A8 449 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 ZNHIT1O43257 154 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 FOSL2P15408 326 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 DUSP1P28562 367 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 ZNF441Q8N8Z8 693 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 TP53RKQ96S44 253 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 SUCNR1Q9BXA5 334 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 ARV1Q9H2C2 271 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 GFOD1Q9NXC2 390 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 H3BMH7 237 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 GEMIN2O14893 280 aaKnown RBP13.85□□□□□ -0.19
LMNB1-201ENST00000261366 FASLGP48023 281 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 RAB1AP62820 205 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 NKX6-1P78426 367 aaPredicted RBP13.85□□□□□ -0.19
LMNB1-201ENST00000261366 FAM189A2Q15884 450 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 SNAI3Q3KNW1 292 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 SPIN3Q5JUX0 258 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 OR2T2Q6IF00 324 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 SSX9Q7RTT3 188 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 MALSU1Q96EH3 234 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 ZDHHC12Q96GR4 267 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 C14orf144Q96I85 54 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 NECAP2Q9NVZ3 263 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 PLEK2Q9NYT0 353 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 WNT16Q9UBV4 365 aa13.85□□□□□ -0.19
LMNB1-201ENST00000261366 IGSF23A1L1A6 192 aa13.84□□□□□ -0.19
LMNB1-201ENST00000261366 H3BP45 60 aa13.84□□□□□ -0.19
LMNB1-201ENST00000261366 PPP1R2P9O14990 202 aa13.84□□□□□ -0.19
LMNB1-201ENST00000261366 KHDC3LQ587J8 217 aa13.84□□□□□ -0.19
LMNB1-201ENST00000261366 LIAT1Q6ZQX7 453 aa13.84□□□□□ -0.19
LMNB1-201ENST00000261366 DMRTC2Q8IXT2 367 aaPredicted RBP13.84□□□□□ -0.19
LMNB1-201ENST00000261366 SSC4DQ8WTU2 575 aa13.84□□□□□ -0.19
LMNB1-201ENST00000261366 TMEM171Q8WVE6 324 aa13.84□□□□□ -0.19
LMNB1-201ENST00000261366 STRAPQ9Y3F4 350 aaKnown RBP13.84□□□□□ -0.19
LMNB1-201ENST00000261366 HNF4GQ14541 408 aa13.84□□□□□ -0.19
LMNB1-201ENST00000261366 PHYHD1Q5SRE7 291 aa13.84□□□□□ -0.19
LMNB1-201ENST00000261366 OR5C1Q8NGR4 320 aa13.84□□□□□ -0.19
LMNB1-201ENST00000261366 POC1BQ8TC44 478 aa13.84□□□□□ -0.19
LMNB1-201ENST00000261366 PRDM13Q9H4Q3 707 aa13.84□□□□□ -0.19
LMNB1-201ENST00000261366 DHRS3O75911 302 aa13.83□□□□□ -0.2
LMNB1-201ENST00000261366 PATE4P0C8F1 98 aa13.83□□□□□ -0.2
LMNB1-201ENST00000261366 CXorf66Q5JRM2 361 aaPredicted RBP13.83□□□□□ -0.2
LMNB1-201ENST00000261366 SLC25A47Q6Q0C1 308 aa13.83□□□□□ -0.2
LMNB1-201ENST00000261366 OR2C3Q8N628 320 aa13.83□□□□□ -0.2
LMNB1-201ENST00000261366 HAS2Q92819 552 aa13.83□□□□□ -0.2
LMNB1-201ENST00000261366 HSD17B6O14756 317 aa13.83□□□□□ -0.2
LMNB1-201ENST00000261366 OR2J2O76002 312 aa13.83□□□□□ -0.2
LMNB1-201ENST00000261366 CD63P08962 238 aa13.83□□□□□ -0.2
LMNB1-201ENST00000261366 SPINK2P20155 84 aa13.83□□□□□ -0.2
LMNB1-201ENST00000261366 UCP2P55851 309 aa13.83□□□□□ -0.2
LMNB1-201ENST00000261366 ZNF837Q96EG3 531 aaPredicted RBP13.83□□□□□ -0.2
LMNB1-201ENST00000261366 YPEL4Q96NS1 127 aa13.83□□□□□ -0.2
LMNB1-201ENST00000261366 MTCH2Q9Y6C9 303 aa13.83□□□□□ -0.2
LMNB1-201ENST00000261366 WSB1Q9Y6I7 421 aa13.83□□□□□ -0.2
LMNB1-201ENST00000261366 A0A1W2PPC4 97 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 G3V3Y1 287 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 EPHA1P21709 976 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 GPR157Q5UAW9 335 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 SPSB3Q6PJ21 355 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 LGI3Q8N145 548 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 OR14L1PQ8NHC6 308 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 BOD1Q96IK1 185 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 Q96M66 194 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 CRLF2Q9HC73 371 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 ZNF587BE7ETH6 402 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 F10P00742 488 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 RPL23AP62750 156 aaKnown RBP13.82□□□□□ -0.2
LMNB1-201ENST00000261366 CFHR1Q03591 330 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 PLPPR5Q32ZL2 321 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 NAT6Q93015 286 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 MSI2Q96DH6 328 aaKnown RBP13.82□□□□□ -0.2
LMNB1-201ENST00000261366 SNX22Q96L94 193 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 NIPSNAP3BQ9BS92 247 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 ZNF407Q9C0G0 2248 aa13.82□□□□□ -0.2
LMNB1-201ENST00000261366 M0R135 149 aa13.81□□□□□ -0.2
LMNB1-201ENST00000261366 HSPB6O14558 160 aa13.81□□□□□ -0.2
LMNB1-201ENST00000261366 SRP19P09132 144 aaKnown RBP13.81□□□□□ -0.2
LMNB1-201ENST00000261366 TRGC1P0CF51 173 aa13.81□□□□□ -0.2
LMNB1-201ENST00000261366 AADACP22760 399 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms