RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 HLXQ14774 488 aaPredicted RBP10.71□□□□□ -0.7
COL8A1-201ENST00000261037 ZNF141Q15928 474 aa10.71□□□□□ -0.7
COL8A1-201ENST00000261037 ZNF561Q8N587 486 aa10.71□□□□□ -0.7
COL8A1-201ENST00000261037 CDX2Q99626 313 aaPredicted RBP10.71□□□□□ -0.7
COL8A1-201ENST00000261037 FLRT3Q9NZU0 649 aa10.71□□□□□ -0.7
COL8A1-201ENST00000261037 MAP1LC3B2A6NCE7 125 aa10.71□□□□□ -0.7
COL8A1-201ENST00000261037 SCGB1C2P0DMR2 95 aa10.71□□□□□ -0.7
COL8A1-201ENST00000261037 CHRNA7P36544 502 aa10.71□□□□□ -0.7
COL8A1-201ENST00000261037 ZIC1Q15915 447 aa10.71□□□□□ -0.7
COL8A1-201ENST00000261037 ZBTB37Q5TC79 503 aa10.71□□□□□ -0.7
COL8A1-201ENST00000261037 MAP1LC3BQ9GZQ8 125 aa10.71□□□□□ -0.7
COL8A1-201ENST00000261037 NAT8BQ9UHF3 227 aa10.71□□□□□ -0.7
COL8A1-201ENST00000261037 YTHDF2Q9Y5A9 579 aaKnown RBP10.71□□□□□ -0.7
COL8A1-201ENST00000261037 USF1P22415 310 aaPredicted RBP10.7□□□□□ -0.7
COL8A1-201ENST00000261037 KIR2DS2P43631 304 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 SELENOPP49908 381 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 DYNLT3P51808 116 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 TBC1D26Q86UD7 250 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 MOGAT3Q86VF5 341 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 COX14Q96I36 57 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 SLC17A5Q9NRA2 495 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 MMP26Q9NRE1 261 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 MRM2Q9UI43 246 aaKnown RBP10.7□□□□□ -0.7
COL8A1-201ENST00000261037 TMED3Q9Y3Q3 217 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 TOX3O15405 576 aaPredicted RBP10.7□□□□□ -0.7
COL8A1-201ENST00000261037 HSBP1O75506 76 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 CST4P01036 141 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 FAM162BQ5T6X4 162 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 DUSP18Q8NEJ0 188 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 OR5D13Q8NGL4 314 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 CACFD1Q9UGQ2 172 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 AMMECR1Q9Y4X0 333 aaPredicted RBP10.7□□□□□ -0.7
COL8A1-201ENST00000261037 G0S2P27469 103 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 BMI1P35226 326 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 RPEL1Q2QD12 228 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 MRM1Q6IN84 353 aaKnown RBP10.7□□□□□ -0.7
COL8A1-201ENST00000261037 ETFRF1Q6IPR1 90 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 TOMM20LQ6UXN7 152 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 ETV3LQ6ZN32 361 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 FAM219AQ8IW50 185 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 ZNF596Q8TC21 504 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 DYRK2Q92630 601 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 GABRG3Q99928 467 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 PRRC2BQ5JSZ5 2229 aaKnown RBP10.7□□□□□ -0.7
COL8A1-201ENST00000261037 COL4A1P02462 1669 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 hADV38S2A0JD32 116 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 PATE3B3GLJ2 98 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 M0R296 226 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 PDCD6O75340 191 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 EML2O95834 649 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 HTN1P15515 57 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 HIST1H3AP68431 136 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 FOXO1Q12778 655 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 ZNF66Q6ZN08 573 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 TMEM208Q9BTX3 173 aa10.7□□□□□ -0.7
COL8A1-201ENST00000261037 CXorf51AA0A1B0GTR3 108 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 NEURL1O76050 574 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 HIKESHIQ53FT3 197 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 OR4D11Q8NGI4 311 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 OR10G4Q8NGN3 311 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 OR10G9Q8NGN4 311 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 OR10G7Q8NGN6 311 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 VAMP8Q9BV40 100 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 RAB1BQ9H0U4 201 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 MTFP1Q9UDX5 166 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 COL11A2P13942 1736 aaPredicted RBP10.69□□□□□ -0.7
COL8A1-201ENST00000261037 DLEC1Q9Y238 1755 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 IGKV3-7A0A075B6H7 116 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 ZNHIT1O43257 154 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 ACTL6AO96019 429 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 CD3EP07766 207 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 CD200P41217 278 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 FOXL2P58012 376 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 ZNF425Q6IV72 752 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 TCFL5Q9UL49 500 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 WNK3Q9BYP7 1800 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 TNFSF14O43557 240 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 ERVS71-1P61550 626 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 WDR34Q96EX3 536 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 RASL10BQ96S79 203 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 UFC1Q9Y3C8 167 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 MS4A18H0YCH9 400 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 GEMIN2O14893 280 aaKnown RBP10.69□□□□□ -0.7
COL8A1-201ENST00000261037 GATCO43716 136 aaKnown RBP10.69□□□□□ -0.7
COL8A1-201ENST00000261037 TBX19O60806 448 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 HNRNPA3P51991 378 aaKnown RBP10.69□□□□□ -0.7
COL8A1-201ENST00000261037 MS4A18Q3C1V0 323 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 ASB13Q8WXK3 278 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 VSTM2LQ96N03 204 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 MMP24Q9Y5R2 645 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 TGOLN2O43493 480 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 ZP3P21754 424 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 TMEM211Q6ICI0 200 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 TRAT1Q6PIZ9 186 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 SEZ6L2Q6UXD5 910 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 RAB40CQ96S21 281 aa10.69□□□□□ -0.7
COL8A1-201ENST00000261037 SEBOXQ9HB31 216 aaPredicted RBP10.69□□□□□ -0.7
COL8A1-201ENST00000261037 BMPR1BO00238 502 aa10.68□□□□□ -0.7
COL8A1-201ENST00000261037 HOXC4P09017 264 aaPredicted RBP10.68□□□□□ -0.7
COL8A1-201ENST00000261037 OR4A8P0C604 315 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms