RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ATP1B3P54709 279 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 UBE2NP61088 152 aaKnown RBP6.77□□□□□ -1.33
GPNMB-201ENST00000258733 GNB2P62879 340 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 RPL8P62917 257 aaKnown RBP6.77□□□□□ -1.33
GPNMB-201ENST00000258733 RPL24P83731 157 aaKnown RBP6.77□□□□□ -1.33
GPNMB-201ENST00000258733 ZNF77Q15935 545 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 MPV17LQ2QL34 196 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 PRICKLE4Q2TBC4 344 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 RBPMS2Q6ZRY4 209 aaKnown RBP6.77□□□□□ -1.33
GPNMB-201ENST00000258733 RNF175Q8N4F7 328 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 TMEM217Q8N7C4 229 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 ZNF676Q8N7Q3 588 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 IGSF8Q969P0 613 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 SPATA33Q96N06 139 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 C1orf43Q9BWL3 253 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 TBC1D17Q9HA65 648 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 ENY2Q9NPA8 101 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 MRPL17Q9NRX2 175 aaKnown RBP6.77□□□□□ -1.33
GPNMB-201ENST00000258733 OR1A1Q9P1Q5 309 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 WRAP73Q9P2S5 460 aaPredicted RBP6.77□□□□□ -1.33
GPNMB-201ENST00000258733 ZNF780BQ9Y6R6 833 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 BRCA1P38398 1863 aaKnown RBP6.77□□□□□ -1.33
GPNMB-201ENST00000258733 SNED1Q8TER0 1413 aa6.77□□□□□ -1.33
GPNMB-201ENST00000258733 BTAF1O14981 1849 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 TEX48A0A1B0GUV7 120 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 OOEPA6NGQ2 149 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 ANKRD30BLA7E2S9 258 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 FTCDNL1E5RQL4 147 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 CLDN34H7C241 214 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 HMGB3O15347 200 aaKnown RBP6.76□□□□□ -1.33
GPNMB-201ENST00000258733 NKX2-8O15522 239 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 RS1O15537 224 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 SNRPBP14678 240 aaKnown RBP6.76□□□□□ -1.33
GPNMB-201ENST00000258733 GPD1P21695 349 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 CST5P28325 142 aaPredicted RBP6.76□□□□□ -1.33
GPNMB-201ENST00000258733 SLC16A1P53985 500 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 UFM1P61960 85 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 BCL2L1Q07817 233 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 SLC25A35Q3KQZ1 300 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 GLIPR1L1Q6UWM5 242 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 C1orf174Q8IYL3 243 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 ARHGEF39Q8N4T4 335 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 ACOT4Q8N9L9 421 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 OR4N2Q8NGD1 307 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 KIR2DL5BQ8NHK3 375 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 MSI2Q96DH6 328 aaKnown RBP6.76□□□□□ -1.33
GPNMB-201ENST00000258733 LMF2Q9BU23 707 aaKnown RBP6.76□□□□□ -1.33
GPNMB-201ENST00000258733 HCAR1Q9BXC0 346 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 NPFFR1Q9GZQ6 430 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 B4GALT7Q9UBV7 327 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 RPL36Q9Y3U8 105 aaKnown RBP6.76□□□□□ -1.33
GPNMB-201ENST00000258733 NCKAP5O14513 1909 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 ZNF682O95780 498 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 HIST1H1EP10412 219 aaKnown RBP6.76□□□□□ -1.33
GPNMB-201ENST00000258733 TCN2P20062 427 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 TIA1P31483 386 aaKnown RBP eCLIP6.76□□□□□ -1.33
GPNMB-201ENST00000258733 GLRXP35754 106 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 ZNF133P52736 654 aaPredicted RBP6.76□□□□□ -1.33
GPNMB-201ENST00000258733 TCL1AP56279 114 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 PDE7AQ13946 482 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 MIDNQ504T8 468 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 UTF1Q5T230 341 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 FAM219BQ5XKK7 198 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 ZNF787Q6DD87 383 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 TRNP1Q6NT89 227 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 KCNIP4Q6PIL6 250 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 Q6ZWC4 215 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 RPS27LQ71UM5 84 aaKnown RBP6.76□□□□□ -1.33
GPNMB-201ENST00000258733 MDGA2Q7Z553 956 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 LAS2Q8IYD9 372 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 ZNF615Q8N8J6 731 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 SUSD6Q92537 303 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 NDRG1Q92597 394 aaKnown RBP6.76□□□□□ -1.33
GPNMB-201ENST00000258733 ST6GALNAC6Q969X2 333 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 PPCDCQ96CD2 204 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 STARD4Q96DR4 205 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 PCED1BQ96HM7 432 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 RTBDNQ9BSG5 229 aaPredicted RBP6.76□□□□□ -1.33
GPNMB-201ENST00000258733 LRRC61Q9BV99 259 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 FNDC4Q9H6D8 234 aaPredicted RBP6.76□□□□□ -1.33
GPNMB-201ENST00000258733 POPDC3Q9HBV1 291 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 MED29Q9NX70 200 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 KIAA1456Q9P272 454 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 RARRES3Q9UL19 164 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 HS3ST2Q9Y278 367 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 MIA3Q5JRA6 1907 aa6.76□□□□□ -1.33
GPNMB-201ENST00000258733 A0A1B0GTI1 187 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 TLCD2A6NGC4 264 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 MSGN1A6NI15 193 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 NPIPB13A6NJU9 1138 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 FABP5P3A8MUU1 101 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 NPIPB4C9JG80 1138 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 ERI3O43414 337 aaKnown RBP6.75□□□□□ -1.33
GPNMB-201ENST00000258733 LATO43561 262 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 SYNGR3O43761 229 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 CRYGBP07316 175 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 RHOCP08134 193 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 PRPH2P23942 346 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 SLC25A1P53007 311 aa6.75□□□□□ -1.33
GPNMB-201ENST00000258733 ACOT6Q3I5F7 207 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms