RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 SAMD13Q5VXD3 122 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 GGNBP1Q5YKI7 109 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 HPSE2Q8WWQ2 592 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 FLYWCH2Q96CP2 140 aaKnown RBP11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 MOGAT1Q96PD6 335 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 UCN2Q96RP3 112 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 PECRQ9BY49 303 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 BEX1Q9HBH7 125 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 TAS2R3Q9NYW6 316 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 RALYQ9UKM9 306 aaKnown RBP11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 LOC390937A0A1W2PQ73 354 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 E5RGE8 158 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 TRIM77I1YAP6 450 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 ACAA1P09110 424 aaPredicted RBP11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 PRDX2P32119 198 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 CLDN20P56880 219 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 CXorf66Q5JRM2 361 aaPredicted RBP11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 ZNF767PQ75MW2 155 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 TMEM52Q8NDY8 209 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 BPIFCQ8NFQ6 507 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 ACTR3CQ9C0K3 210 aaPredicted RBP11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 SH3BGRL3Q9H299 93 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 DUSP21Q9H596 190 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 ADGRL4Q9HBW9 690 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 SLC7A10Q9NS82 523 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 NSG2Q9Y328 171 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 CEPT1Q9Y6K0 416 aa11.73□□□□□ -0.53
PRPF38A-201ENST00000257181 K7N7A8 449 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 SMAD9O15198 467 aaKnown RBP11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 SPRY1O43609 319 aaPredicted RBP11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 YBX1P67809 324 aaKnown RBP11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 Q6ZS92 163 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 OR4C13Q8NGP0 309 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 OR13F1Q8NGS4 319 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 TINAGQ9UJW2 476 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 C3orf80F5H4A9 247 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 TM4SF5O14894 197 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 CA7P43166 264 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 Q6ZPB1 254 aaPredicted RBP11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 PXT1Q8NFP0 134 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 OR10K1Q8NGX5 313 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 WDYHV1Q96HA8 205 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 SIGLEC12Q96PQ1 595 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 RAB40CQ96S21 281 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 RBFOX1Q9NWB1 397 aaKnown RBP11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 DUXBA0A1W2PPF3 345 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 COX5AP20674 150 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 FAM162BQ5T6X4 162 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 UMODP07911 640 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 FGF9P31371 208 aaPredicted RBP11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 PHLDA2Q53GA4 152 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 DHRS7BQ6IAN0 325 aaPredicted RBP11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 IKZF5Q9H5V7 419 aa11.72□□□□□ -0.53
PRPF38A-201ENST00000257181 MDFIC2A0A1B0GVS7 189 aa11.71□□□□□ -0.53
PRPF38A-201ENST00000257181 MT-ND4P03905 459 aa11.71□□□□□ -0.53
PRPF38A-201ENST00000257181 GIFP27352 417 aa11.71□□□□□ -0.53
PRPF38A-201ENST00000257181 PDCD1Q15116 288 aa11.71□□□□□ -0.53
PRPF38A-201ENST00000257181 LILRB4Q8NHJ6 448 aa11.71□□□□□ -0.53
PRPF38A-201ENST00000257181 SOX7Q9BT81 388 aa11.71□□□□□ -0.53
PRPF38A-201ENST00000257181 OR51I2Q9H344 312 aa11.71□□□□□ -0.53
PRPF38A-201ENST00000257181 SAV1Q9H4B6 383 aaPredicted RBP11.71□□□□□ -0.53
PRPF38A-201ENST00000257181 MEIS3P1A6NDR6 274 aa11.71□□□□□ -0.53
PRPF38A-201ENST00000257181 ORM1P02763 201 aa11.71□□□□□ -0.53
PRPF38A-201ENST00000257181 CYB5R2Q6BCY4 276 aa11.71□□□□□ -0.53
PRPF38A-201ENST00000257181 ZNF770Q6IQ21 691 aaPredicted RBP11.71□□□□□ -0.53
PRPF38A-201ENST00000257181 ARV1Q9H2C2 271 aa11.71□□□□□ -0.53
PRPF38A-201ENST00000257181 KRASP01116 189 aa11.71□□□□□ -0.54
PRPF38A-201ENST00000257181 RAB9AP51151 201 aa11.71□□□□□ -0.54
PRPF38A-201ENST00000257181 OR2V2Q96R30 315 aa11.71□□□□□ -0.54
PRPF38A-201ENST00000257181 COA4Q9NYJ1 87 aa11.71□□□□□ -0.54
PRPF38A-201ENST00000257181 HSPB11Q9Y547 144 aa11.71□□□□□ -0.54
PRPF38A-201ENST00000257181 RAB29O14966 203 aa11.71□□□□□ -0.54
PRPF38A-201ENST00000257181 SSX4O60224 188 aa11.71□□□□□ -0.54
PRPF38A-201ENST00000257181 ATP5IP56385 69 aaPredicted RBP11.71□□□□□ -0.54
PRPF38A-201ENST00000257181 ATP1A1-AS1Q5TC04 95 aa11.71□□□□□ -0.54
PRPF38A-201ENST00000257181 ACSM6Q6P461 480 aa11.71□□□□□ -0.54
PRPF38A-201ENST00000257181 APCDD1LQ8NCL9 501 aa11.71□□□□□ -0.54
PRPF38A-201ENST00000257181 OR1L1Q8NH94 360 aa11.71□□□□□ -0.54
PRPF38A-201ENST00000257181 C19orf12Q9NSK7 152 aa11.71□□□□□ -0.54
PRPF38A-201ENST00000257181 CMC4P56277 68 aaPredicted RBP11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 LYPD4Q6UWN0 246 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 DMRTB1Q96MA1 342 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 TNFRSF12AQ9NP84 129 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 C20orf141Q9NUB4 165 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 GNG10P50151 68 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 HLA-DRB3P79483 266 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 MEF2CQ06413 473 aaPredicted RBP11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 LCN10Q6JVE6 187 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 STPG3Q8N7X2 389 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 TMEM186Q96B77 213 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 PCGF1Q9BSM1 259 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 OR5H14A6NHG9 310 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 PF4P02776 101 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 HTR1DP28221 377 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 CCR6P51684 374 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 GP2P55259 537 aaKnown RBP11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 BMPERQ8N8U9 685 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 OR4S1Q8NGB4 309 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 OR4X2Q8NGF9 303 aa11.7□□□□□ -0.54
PRPF38A-201ENST00000257181 ITPKCQ96DU7 683 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms