RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 ZDHHC23Q8IYP9 409 aa18.64■□□□□ 0.57
CLN6-201ENST00000249806 FDCSPQ8NFU4 85 aa18.64■□□□□ 0.57
CLN6-201ENST00000249806 OR1K1Q8NGR3 316 aa18.64■□□□□ 0.57
CLN6-201ENST00000249806 ZNF318Q5VUA4 2279 aa18.63■□□□□ 0.57
CLN6-201ENST00000249806 ZNF732B4DXR9 585 aa18.63■□□□□ 0.57
CLN6-201ENST00000249806 LILRA1O75019 489 aa18.63■□□□□ 0.57
CLN6-201ENST00000249806 CTSDP07339 412 aaPredicted RBP18.63■□□□□ 0.57
CLN6-201ENST00000249806 CLN3Q13286 438 aa18.63■□□□□ 0.57
CLN6-201ENST00000249806 PDZD9Q8IXQ8 264 aa18.63■□□□□ 0.57
CLN6-201ENST00000249806 GSKIPQ9P0R6 139 aa18.63■□□□□ 0.57
CLN6-201ENST00000249806 F5H0A9 414 aaPredicted RBP18.62■□□□□ 0.57
CLN6-201ENST00000249806 SCO1O75880 301 aa18.62■□□□□ 0.57
CLN6-201ENST00000249806 WT1P19544 449 aaPredicted RBP18.62■□□□□ 0.57
CLN6-201ENST00000249806 ECI1P42126 302 aa18.62■□□□□ 0.57
CLN6-201ENST00000249806 FXYD4P59646 89 aa18.62■□□□□ 0.57
CLN6-201ENST00000249806 BCL2L2Q92843 193 aaPredicted RBP18.62■□□□□ 0.57
CLN6-201ENST00000249806 ASCL3Q9NQ33 180 aa18.62■□□□□ 0.57
CLN6-201ENST00000249806 OR5AC2Q9NZP5 309 aa18.62■□□□□ 0.57
CLN6-201ENST00000249806 IL36RNQ9UBH0 155 aa18.62■□□□□ 0.57
CLN6-201ENST00000249806 KCNMB2Q9Y691 235 aa18.62■□□□□ 0.57
CLN6-201ENST00000249806 TRBV6-7A0A0A0MS04 114 aa18.62■□□□□ 0.57
CLN6-201ENST00000249806 TEX13DA0A0J9YY54 714 aaPredicted RBP18.62■□□□□ 0.57
CLN6-201ENST00000249806 CD300LBA8K4G0 201 aa18.62■□□□□ 0.57
CLN6-201ENST00000249806 CST4P01036 141 aa18.62■□□□□ 0.57
CLN6-201ENST00000249806 CD82P27701 267 aa18.62■□□□□ 0.57
CLN6-201ENST00000249806 SGPP2Q8IWX5 399 aa18.62■□□□□ 0.57
CLN6-201ENST00000249806 MED9Q9NWA0 146 aa18.62■□□□□ 0.57
CLN6-201ENST00000249806 MTCH1Q9NZJ7 389 aa18.62■□□□□ 0.57
CLN6-201ENST00000249806 ESPL1Q14674 2120 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 FCGR2CP31995 323 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 APLNRP35414 380 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 RBMXP38159 391 aaKnown RBP18.61■□□□□ 0.57
CLN6-201ENST00000249806 PIGPP57054 158 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 RAB32Q13637 225 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 MDP1Q86V88 176 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 Q8NFD4 153 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 C2orf50Q96LR7 162 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 NARFLQ9H6Q4 476 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 C12orf4Q9NQ89 552 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 TMA7Q9Y2S6 64 aaKnown RBP18.61■□□□□ 0.57
CLN6-201ENST00000249806 CRYM-AS1A6NIL9 109 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 CRYZL1O95825 349 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 C5orf24Q7Z6I8 188 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 LRRC20Q8TCA0 184 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 CCDC120Q96HB5 630 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 ARPC5LQ9BPX5 153 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 ZNF286AQ9HBT8 521 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 RASL12Q9NYN1 266 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 PFDN2Q9UHV9 154 aa18.61■□□□□ 0.57
CLN6-201ENST00000249806 CDK2AP1O14519 115 aa18.6■□□□□ 0.57
CLN6-201ENST00000249806 ZNF728P0DKX0 622 aa18.6■□□□□ 0.57
CLN6-201ENST00000249806 RBM39Q14498 530 aaKnown RBP18.6■□□□□ 0.57
CLN6-201ENST00000249806 POC1AQ8NBT0 407 aa18.6■□□□□ 0.57
CLN6-201ENST00000249806 C1orf123Q9NWV4 160 aa18.6■□□□□ 0.57
CLN6-201ENST00000249806 A0A1W2PR80 420 aa18.59■□□□□ 0.57
CLN6-201ENST00000249806 MSGN1A6NI15 193 aa18.59■□□□□ 0.57
CLN6-201ENST00000249806 IL32P24001 234 aa18.59■□□□□ 0.57
CLN6-201ENST00000249806 IL15RAQ13261 267 aa18.59■□□□□ 0.57
CLN6-201ENST00000249806 SP6Q3SY56 376 aa18.59■□□□□ 0.57
CLN6-201ENST00000249806 GCNT2Q8N0V5 402 aa18.59■□□□□ 0.57
CLN6-201ENST00000249806 SLC25A32Q9H2D1 315 aa18.59■□□□□ 0.57
CLN6-201ENST00000249806 DSPP15924 2871 aaKnown RBP18.59■□□□□ 0.57
CLN6-201ENST00000249806 BOD1L1Q8NFC6 3051 aa18.59■□□□□ 0.57
CLN6-201ENST00000249806 C3orf80F5H4A9 247 aa18.59■□□□□ 0.57
CLN6-201ENST00000249806 LGALS8O00214 317 aa18.59■□□□□ 0.57
CLN6-201ENST00000249806 SYNGR1O43759 233 aa18.59■□□□□ 0.57
CLN6-201ENST00000249806 DUSP1P28562 367 aa18.59■□□□□ 0.57
CLN6-201ENST00000249806 IGFBP7Q16270 282 aa18.59■□□□□ 0.57
CLN6-201ENST00000249806 SPATA46Q5T0L3 261 aa18.59■□□□□ 0.57
CLN6-201ENST00000249806 TMEM211Q6ICI0 200 aa18.59■□□□□ 0.57
CLN6-201ENST00000249806 MYPOPQ86VE0 399 aaPredicted RBP18.59■□□□□ 0.57
CLN6-201ENST00000249806 GLI4P10075 376 aa18.58■□□□□ 0.57
CLN6-201ENST00000249806 FGF12P61328 243 aa18.58■□□□□ 0.57
CLN6-201ENST00000249806 PLEKHN1Q494U1 663 aaPredicted RBP18.58■□□□□ 0.57
CLN6-201ENST00000249806 PRSS54Q6PEW0 395 aa18.58■□□□□ 0.57
CLN6-201ENST00000249806 P4HA3Q7Z4N8 544 aa18.58■□□□□ 0.57
CLN6-201ENST00000249806 FOXRED2Q8IWF2 684 aa18.58■□□□□ 0.57
CLN6-201ENST00000249806 SLC30A7Q8NEW0 376 aa18.58■□□□□ 0.57
CLN6-201ENST00000249806 OR5A2Q8NGI9 324 aa18.58■□□□□ 0.57
CLN6-201ENST00000249806 EXTL1Q92935 676 aa18.58■□□□□ 0.57
CLN6-201ENST00000249806 LINC00052Q96N35 136 aa18.58■□□□□ 0.57
CLN6-201ENST00000249806 HIST1H2AAQ96QV6 131 aa18.58■□□□□ 0.57
CLN6-201ENST00000249806 HSPB6O14558 160 aa18.58■□□□□ 0.56
CLN6-201ENST00000249806 PHLDA2Q53GA4 152 aa18.58■□□□□ 0.56
CLN6-201ENST00000249806 IGSF11Q5DX21 431 aa18.58■□□□□ 0.56
CLN6-201ENST00000249806 ELP2Q6IA86 826 aa18.58■□□□□ 0.56
CLN6-201ENST00000249806 OR2T2Q6IF00 324 aa18.58■□□□□ 0.56
CLN6-201ENST00000249806 ZNF488Q96MN9 340 aa18.58■□□□□ 0.56
CLN6-201ENST00000249806 CELA3BP08861 270 aa18.57■□□□□ 0.56
CLN6-201ENST00000249806 S100A10P60903 97 aa18.57■□□□□ 0.56
CLN6-201ENST00000249806 HAGHLQ6PII5 290 aaPredicted RBP18.57■□□□□ 0.56
CLN6-201ENST00000249806 RTN4IP1Q8WWV3 396 aaPredicted RBP18.57■□□□□ 0.56
CLN6-201ENST00000249806 OR5P3Q8WZ94 311 aa18.57■□□□□ 0.56
CLN6-201ENST00000249806 PIK3IP1Q96FE7 263 aa18.57■□□□□ 0.56
CLN6-201ENST00000249806 TRAPPC2LH3BP13 241 aa18.57■□□□□ 0.56
CLN6-201ENST00000249806 IAH1Q2TAA2 248 aaPredicted RBP18.57■□□□□ 0.56
CLN6-201ENST00000249806 ABCA11PQ4W5N1 156 aa18.57■□□□□ 0.56
CLN6-201ENST00000249806 TMEM200AQ86VY9 491 aa18.57■□□□□ 0.56
CLN6-201ENST00000249806 SAXO1Q8IYX7 474 aa18.57■□□□□ 0.56
CLN6-201ENST00000249806 MRPL24Q96A35 216 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms