RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 RAB3CQ96E17 227 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 NEDD4LQ96PU5 975 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 PSMG3-AS1Q96PY0 264 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 SRRQ9GZT4 340 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 BANF2Q9H503 90 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 PLEKHF2Q9H8W4 249 aa10.91□□□□□ -0.66
LSM8-201ENST00000249299 A0A1W2PP11 408 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 hCG_1807616A0A1W2PRN6 198 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 GABARAPH6UMI1 98 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 OVOL3O00110 214 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 PDCD6O75340 191 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 SOD3P08294 240 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 MUC1P15941 1255 aaPredicted RBP10.9□□□□□ -0.66
LSM8-201ENST00000249299 HIST1H1DP16402 221 aaKnown RBP10.9□□□□□ -0.66
LSM8-201ENST00000249299 GLRA1P23415 457 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 BLVRBP30043 206 aaPredicted RBP10.9□□□□□ -0.66
LSM8-201ENST00000249299 SSTR2P30874 369 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 KCNJ3P48549 501 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 VEGFCP49767 419 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 PLA2G7Q13093 441 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 ZNF260Q3ZCT1 412 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 ACP7Q6ZNF0 438 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 Q6ZTK2 550 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 MOGAT3Q86VF5 341 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 LRRC29Q8WV35 223 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 IGFBPL1Q8WX77 278 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 EMG1Q92979 244 aaKnown RBP10.9□□□□□ -0.66
LSM8-201ENST00000249299 ABHD1Q96SE0 405 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 DNTTIP1Q9H147 329 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 AUNIPQ9H7T9 357 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 UFSP2Q9NUQ7 469 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 RBFOX1Q9NWB1 397 aaKnown RBP10.9□□□□□ -0.66
LSM8-201ENST00000249299 TREM2Q9NZC2 230 aa10.9□□□□□ -0.66
LSM8-201ENST00000249299 RCC2Q9P258 522 aaKnown RBP10.9□□□□□ -0.66
LSM8-201ENST00000249299 ZNF107Q9UII5 783 aaPredicted RBP10.9□□□□□ -0.66
LSM8-201ENST00000249299 TRAV18A0A075B6X5 111 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 A0A0A6YYD4 124 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 IGHV1-69-2A0A0G2JMI3 117 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 A0A0G2JMP0 313 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 A0A0X1KG70 313 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 SH2D1BO14796 132 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 PRKACAP17612 351 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 LMO1P25800 156 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 CHATP28329 748 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 PRSS3P35030 304 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 CBX5P45973 191 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 TMEM50BP56557 158 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 DCTN2Q13561 401 aaKnown RBP10.89□□□□□ -0.67
LSM8-201ENST00000249299 RBM39Q14498 530 aaKnown RBP10.89□□□□□ -0.67
LSM8-201ENST00000249299 KCNJ8Q15842 424 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 TAF9Q16594 264 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 PYDC2Q56P42 97 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 SHEQ5VZ18 495 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 TEX36Q5VZQ5 186 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 ZNF826PQ6ZT77 177 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 BIVMQ86UB2 503 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 Q8N402 240 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 GCSAMQ8N6F7 178 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 OR4M2Q8NGB6 313 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 SMIM4Q8WVI0 70 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 ST8SIA4Q92187 359 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 RIMS4Q9H426 269 aaPredicted RBP10.89□□□□□ -0.67
LSM8-201ENST00000249299 KCNK15Q9H427 330 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 UBTD1Q9HAC8 227 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 EDARQ9UNE0 448 aa10.89□□□□□ -0.67
LSM8-201ENST00000249299 HELZ2Q9BYK8 2649 aaKnown RBP10.89□□□□□ -0.67
LSM8-201ENST00000249299 USP9YO00507 2555 aaPredicted RBP10.89□□□□□ -0.67
LSM8-201ENST00000249299 ISPDA4D126 451 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 F8VVB4 439 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 F8VWA3 439 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 TMEM178BH3BS89 294 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 MFNGO00587 321 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 GEMIN2O14893 280 aaKnown RBP10.88□□□□□ -0.67
LSM8-201ENST00000249299 SOCS1O15524 211 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 NDUFA2O43678 99 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 UPK1BO75841 260 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 OR7C1O76099 320 aaPredicted RBP10.88□□□□□ -0.67
LSM8-201ENST00000249299 LPLP06858 475 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 PAX5Q02548 391 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 MICBQ29980 383 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 HFEQ30201 348 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 CDNFQ49AH0 187 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 ATPAF1Q5TC12 328 aaPredicted RBP10.88□□□□□ -0.67
LSM8-201ENST00000249299 SIGIRRQ6IA17 410 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 FCAMRQ8WWV6 532 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 RDH5Q92781 318 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 VRK1Q99986 396 aaPredicted RBP10.88□□□□□ -0.67
LSM8-201ENST00000249299 NICN1Q9BSH3 213 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 CACNG6Q9BXT2 260 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 CXorf56Q9H5V9 222 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 MYOZ1Q9NP98 299 aaPredicted RBP10.88□□□□□ -0.67
LSM8-201ENST00000249299 TMEM106BQ9NUM4 274 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 PLEKHJ1Q9NW61 149 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 TAS2R8Q9NYW2 309 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 LAMP3Q9UQV4 416 aa10.88□□□□□ -0.67
LSM8-201ENST00000249299 MRPS7Q9Y2R9 242 aaKnown RBP10.88□□□□□ -0.67
LSM8-201ENST00000249299 RBMX2Q9Y388 322 aaKnown RBP10.88□□□□□ -0.67
LSM8-201ENST00000249299 TRAV38-1A0A0B4J264 116 aa10.87□□□□□ -0.67
LSM8-201ENST00000249299 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.87□□□□□ -0.67
LSM8-201ENST00000249299 LGALS8O00214 317 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms