RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 LHFPL5Q8TAF8 219 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 ADAMTS17Q8TE56 1095 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 LRRC46Q96FV0 321 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 TECTBQ96PL2 329 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 FGF23Q9GZV9 251 aaPredicted RBP16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 PARPBPQ9NWS1 579 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 TUBD1Q9UJT1 453 aa16.85■□□□□ 0.29
CDC42EP1-201ENST00000249014 RAB19A4D1S5 217 aa16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 RPL36A-HNRNPH2H7BZ11 118 aa16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 ACTL6AO96019 429 aa16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 OR5AC1P0C628 307 aa16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 DEFA5Q01523 94 aa16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 MALLQ13021 153 aa16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 TMEM251Q8N6I4 163 aa16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 REPIN1Q9BWE0 567 aaKnown RBP16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 ATPIF1Q9UII2 106 aa16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 C21orf140B9A014 251 aa16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 ATF4P18848 351 aaPredicted RBP16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 TMEM187Q14656 261 aa16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 RPL7L1Q6DKI1 246 aaKnown RBP16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 UQCC3Q6UW78 93 aa16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 CCDC36Q8IYA8 594 aa16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 RTN4IP1Q8WWV3 396 aaPredicted RBP16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 PAPOLGQ9BWT3 736 aaKnown RBP16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 NAA60Q9H7X0 242 aa16.84■□□□□ 0.29
CDC42EP1-201ENST00000249014 C5orf49A4QMS7 147 aa16.83■□□□□ 0.28
CDC42EP1-201ENST00000249014 OR7C1O76099 320 aaPredicted RBP16.83■□□□□ 0.28
CDC42EP1-201ENST00000249014 C3AR1Q16581 482 aa16.83■□□□□ 0.28
CDC42EP1-201ENST00000249014 PHLDA2Q53GA4 152 aa16.83■□□□□ 0.28
CDC42EP1-201ENST00000249014 ZNF286AQ9HBT8 521 aa16.83■□□□□ 0.28
CDC42EP1-201ENST00000249014 C12orf4Q9NQ89 552 aa16.83■□□□□ 0.28
CDC42EP1-201ENST00000249014 IL17BQ9UHF5 180 aa16.83■□□□□ 0.28
CDC42EP1-201ENST00000249014 PQLC2LA1A4F0 135 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 CDX4O14627 284 aaPredicted RBP16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 DEDDO75618 318 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 SYNGR4O95473 234 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 IFNA21P01568 189 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 GLI4P10075 376 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 FUT3P21217 361 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 SRSF3P84103 164 aaKnown RBP16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 MST1LQ2TV78 715 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 ABCA11PQ4W5N1 156 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 TMEM164Q5U3C3 297 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 GALNT14Q96FL9 552 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 ZNF442Q9H7R0 627 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 SLC2A9Q9NRM0 540 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 ZNF629Q9UEG4 869 aaPredicted RBP16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 KNTC1P50748 2209 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 RCC1P18754 421 aaPredicted RBP16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 PRDX4Q13162 271 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 OR11L1Q8NGX0 322 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 HPSE2Q8WWQ2 592 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 HS3ST6Q96QI5 342 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 PCDHB16Q9NRJ7 776 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 ABI3Q9P2A4 366 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 KCNIP3Q9Y2W7 256 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 ARHGAP21Q5T5U3 1957 aa16.82■□□□□ 0.28
CDC42EP1-201ENST00000249014 TRIM77I1YAP6 450 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 BCL3P20749 454 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 RPL12P30050 165 aaKnown RBP16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 SLAMF9Q96A28 289 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 MOB3AQ96BX8 217 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 STARD10Q9Y365 291 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 LSM5Q9Y4Y9 91 aaKnown RBP16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 TNRC6AQ8NDV7 1962 aaKnown RBP16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 TMEM218A2RU14 115 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 ZNF705EA8MWA4 302 aaPredicted RBP16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 DNASE2O00115 360 aaPredicted RBP16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 ABCD4O14678 606 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 ADCYAP1P18509 176 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 GPM6AP51674 278 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 PLGLB1Q02325 96 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 PLA2G2CQ5R387 149 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 TMEM211Q6ICI0 200 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 LYZL2Q7Z4W2 148 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 Q8NFD4 153 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 OR5L1Q8NGL2 311 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 OR4A4PQ8NGN8 299 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 ZC4H2Q9NQZ6 224 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 LPAR3Q9UBY5 353 aa16.81■□□□□ 0.28
CDC42EP1-201ENST00000249014 DOCK7Q96N67 2140 aa16.8■□□□□ 0.28
CDC42EP1-201ENST00000249014 K7EPK0 472 aa16.8■□□□□ 0.28
CDC42EP1-201ENST00000249014 SCGB1D2O95969 90 aa16.8■□□□□ 0.28
CDC42EP1-201ENST00000249014 MT-CO3P00414 261 aa16.8■□□□□ 0.28
CDC42EP1-201ENST00000249014 NGFP01138 241 aa16.8■□□□□ 0.28
CDC42EP1-201ENST00000249014 HAAOP46952 286 aa16.8■□□□□ 0.28
CDC42EP1-201ENST00000249014 C5orf24Q7Z6I8 188 aa16.8■□□□□ 0.28
CDC42EP1-201ENST00000249014 FAM71E2Q8N5Q1 922 aa16.8■□□□□ 0.28
CDC42EP1-201ENST00000249014 ARL11Q969Q4 196 aa16.8■□□□□ 0.28
CDC42EP1-201ENST00000249014 PRRX2Q99811 253 aa16.8■□□□□ 0.28
CDC42EP1-201ENST00000249014 TAF9BQ9HBM6 251 aa16.8■□□□□ 0.28
CDC42EP1-201ENST00000249014 TAAR5O14804 337 aa16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 AADACP22760 399 aa16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 IGSF11Q5DX21 431 aa16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 NUFIP2Q7Z417 695 aaKnown RBP16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 GLYATL2Q8WU03 294 aa16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 APH1AQ96BI3 265 aa16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 AMDHD2Q9Y303 409 aa16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 FAM74A7A6NL05 159 aa16.79■□□□□ 0.28
CDC42EP1-201ENST00000249014 ZNF724A8MTY0 619 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms