RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 ZNF92Q03936 586 aa12.46□□□□□ -0.41
HIF3A-202ENST00000244303 SWI5Q1ZZU3 235 aa12.46□□□□□ -0.41
HIF3A-202ENST00000244303 WIPI1Q5MNZ9 446 aaPredicted RBP12.46□□□□□ -0.41
HIF3A-202ENST00000244303 SLC22A25Q6T423 547 aa12.46□□□□□ -0.41
HIF3A-202ENST00000244303 C6orf15Q6UXA7 325 aaPredicted RBP12.46□□□□□ -0.41
HIF3A-202ENST00000244303 TIPARPQ7Z3E1 657 aaKnown RBP12.46□□□□□ -0.41
HIF3A-202ENST00000244303 FBXL14Q8N1E6 418 aa12.46□□□□□ -0.41
HIF3A-202ENST00000244303 OSR2Q8N2R0 312 aa12.46□□□□□ -0.41
HIF3A-202ENST00000244303 RXFP4Q8TDU9 374 aa12.46□□□□□ -0.41
HIF3A-202ENST00000244303 SMIM3Q9BZL3 60 aa12.46□□□□□ -0.41
HIF3A-202ENST00000244303 OR2H1Q9GZK4 316 aa12.46□□□□□ -0.41
HIF3A-202ENST00000244303 hCG_38984A0A1B0GV85 526 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 PQLC2LA1A4F0 135 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 LRRC3CA6NJW4 275 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 OR5AC1P0C628 307 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 SULT1A2P50226 295 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 CAV2P51636 162 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 TMEM33P57088 247 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 TMEM187Q14656 261 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 PDCD1Q15116 288 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 ABCA11PQ4W5N1 156 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 TSPO2Q5TGU0 170 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 ABLIM2Q6H8Q1 611 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 CT55Q8WUE5 264 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 RTN4IP1Q8WWV3 396 aaPredicted RBP12.46□□□□□ -0.42
HIF3A-202ENST00000244303 ADGRG7Q96K78 797 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 NRIP2Q9BQI9 281 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 NAA60Q9H7X0 242 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 PLA2G2EQ9NZK7 142 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 ST3GAL6Q9Y274 331 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 KCNIP3Q9Y2W7 256 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 AMDHD2Q9Y303 409 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 TIMM10BQ9Y5J6 103 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 MUC3AQ02505 3323 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 WDFY4Q6ZS81 3184 aa12.46□□□□□ -0.42
HIF3A-202ENST00000244303 SHANK1Q9Y566 2161 aa12.45□□□□□ -0.42
HIF3A-202ENST00000244303 COL27A1Q8IZC6 1860 aaPredicted RBP12.45□□□□□ -0.42
HIF3A-202ENST00000244303 CLDN15P56746 228 aa12.45□□□□□ -0.42
HIF3A-202ENST00000244303 S100A12P80511 92 aa12.45□□□□□ -0.42
HIF3A-202ENST00000244303 SKA3Q8IX90 412 aa12.45□□□□□ -0.42
HIF3A-202ENST00000244303 OR2V1Q8NHB1 315 aa12.45□□□□□ -0.42
HIF3A-202ENST00000244303 BCO1Q9HAY6 547 aa12.45□□□□□ -0.42
HIF3A-202ENST00000244303 DEPPQ9NTK1 212 aa12.45□□□□□ -0.42
HIF3A-202ENST00000244303 LHX6Q9UPM6 363 aa12.45□□□□□ -0.42
HIF3A-202ENST00000244303 COL6A3P12111 3177 aa12.45□□□□□ -0.42
HIF3A-202ENST00000244303 SP9P0CG40 484 aa12.45□□□□□ -0.42
HIF3A-202ENST00000244303 PHLDA2Q53GA4 152 aa12.45□□□□□ -0.42
HIF3A-202ENST00000244303 AKIRIN2Q53H80 203 aa12.45□□□□□ -0.42
HIF3A-202ENST00000244303 PLCXD3Q63HM9 321 aa12.45□□□□□ -0.42
HIF3A-202ENST00000244303 CLEC9AQ6UXN8 241 aa12.45□□□□□ -0.42
HIF3A-202ENST00000244303 PIGCQ92535 297 aa12.45□□□□□ -0.42
HIF3A-202ENST00000244303 GPR35Q9HC97 309 aa12.45□□□□□ -0.42
HIF3A-202ENST00000244303 RCC2Q9P258 522 aaKnown RBP12.45□□□□□ -0.42
HIF3A-202ENST00000244303 PCSK5Q92824 1860 aa12.45□□□□□ -0.42
HIF3A-202ENST00000244303 ZNF587BE7ETH6 402 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 M0R296 226 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 AGPAT2O15120 278 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 JTBO76095 146 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 F10P00742 488 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 MBPP02686 304 aaPredicted RBP12.44□□□□□ -0.42
HIF3A-202ENST00000244303 GLI4P10075 376 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 HOXB1P14653 301 aaPredicted RBP12.44□□□□□ -0.42
HIF3A-202ENST00000244303 ID4P47928 161 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 FUT6P51993 359 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 PEA15Q15121 130 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 LYZL2Q7Z4W2 148 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 ZNF100Q8IYN0 542 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 BATF2Q8N1L9 274 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 ABHD3Q8WU67 409 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 ERGIC1Q969X5 290 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 GALNT14Q96FL9 552 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 ZNF845Q96IR2 970 aaPredicted RBP12.44□□□□□ -0.42
HIF3A-202ENST00000244303 SLC2A9Q9NRM0 540 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 ZNF391Q9UJN7 358 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 SLC7A11Q9UPY5 501 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 IGHV3-9P01782 118 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 GAPDHP04406 335 aaKnown RBP12.44□□□□□ -0.42
HIF3A-202ENST00000244303 EDN3P14138 238 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 SSPNQ14714 243 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 BTNL8Q6UX41 500 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 Q6ZPA2 131 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 OR5L1Q8NGL2 311 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 SFT2D1Q8WV19 159 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 TAAR9Q96RI9 348 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 STRADBQ9C0K7 418 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 RGCCQ9H4X1 137 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 ZNF286AQ9HBT8 521 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 IL36GQ9NZH8 169 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 FREM1Q5H8C1 2179 aa12.44□□□□□ -0.42
HIF3A-202ENST00000244303 PINLYPA6NC86 204 aa12.43□□□□□ -0.42
HIF3A-202ENST00000244303 RNASEK-C17orf49H0YIS7 233 aa12.43□□□□□ -0.42
HIF3A-202ENST00000244303 DIRAS3O95661 229 aa12.43□□□□□ -0.42
HIF3A-202ENST00000244303 IFNA4P05014 189 aa12.43□□□□□ -0.42
HIF3A-202ENST00000244303 GDF1P27539 372 aa12.43□□□□□ -0.42
HIF3A-202ENST00000244303 PCBD1P61457 104 aa12.43□□□□□ -0.42
HIF3A-202ENST00000244303 OR8B8Q15620 311 aa12.43□□□□□ -0.42
HIF3A-202ENST00000244303 RIPPLY2Q5TAB7 128 aa12.43□□□□□ -0.42
HIF3A-202ENST00000244303 Q6ZRG5 221 aa12.43□□□□□ -0.42
HIF3A-202ENST00000244303 CALHM1Q8IU99 346 aa12.43□□□□□ -0.42
HIF3A-202ENST00000244303 OR11L1Q8NGX0 322 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms