RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 PLEKHA1Q9HB21 404 aa11.27□□□□□ -0.6
DDX39A-201ENST00000242776 GPR84Q9NQS5 396 aa11.27□□□□□ -0.6
DDX39A-201ENST00000242776 SIRT4Q9Y6E7 314 aaPredicted RBP11.27□□□□□ -0.6
DDX39A-201ENST00000242776 hCG_38984A0A1B0GV85 526 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 NDUFA2O43678 99 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 ECDO95905 644 aaPredicted RBP11.26□□□□□ -0.61
DDX39A-201ENST00000242776 SERPINA3P01011 423 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 IGLV3-1P01715 115 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 TFF1P04155 84 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 SELLP14151 372 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 CCL1P22362 96 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 DDOSTP39656 456 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 MAP2K3P46734 347 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 EFNB2P52799 333 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 ZNF92Q03936 586 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 DOC2BQ14184 412 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 FTMTQ8N4E7 242 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 OR5T2Q8NGG2 359 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 GPR148Q8TDV2 347 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 GHSRQ92847 366 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 SGK3Q96BR1 496 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 NKX3-1Q99801 234 aaPredicted RBP11.26□□□□□ -0.61
DDX39A-201ENST00000242776 NDUFB11Q9NX14 153 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 ZNF319Q9P2F9 582 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 DNAH3Q8TD57 4116 aa11.26□□□□□ -0.61
DDX39A-201ENST00000242776 DHRS7CA6NNS2 312 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 CD2P06729 351 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 MAPK3P27361 379 aaPredicted RBP11.25□□□□□ -0.61
DDX39A-201ENST00000242776 RPL5P46777 297 aaKnown RBP11.25□□□□□ -0.61
DDX39A-201ENST00000242776 GP2P55259 537 aaKnown RBP11.25□□□□□ -0.61
DDX39A-201ENST00000242776 CCBE1Q6UXH8 406 aaPredicted RBP11.25□□□□□ -0.61
DDX39A-201ENST00000242776 CMTM4Q8IZR5 234 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 Q8N7P7 452 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 CSNK2A3Q8NEV1 391 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 OR4C13Q8NGP0 309 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 OR13C3Q8NGS6 347 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 OR5R1Q8NH85 324 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 OR2T6Q8NHC8 308 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 LRRC29Q8WV35 223 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 R3HDM4Q96D70 268 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 LYZL4Q96KX0 146 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 SSX3Q99909 188 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 DHDHQ9UQ10 334 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 A0A1B0GTI1 187 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 GMDSO60547 372 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 OCM2P0CE71 109 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 CD28P10747 220 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 GSK3AP49840 483 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 FAM3AP98173 230 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 GUCA2AQ02747 115 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 RIPPLY1Q0D2K3 151 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 HABP2Q14520 560 aaPredicted RBP11.25□□□□□ -0.61
DDX39A-201ENST00000242776 TIMM50Q3ZCQ8 353 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 FOXB2Q5VYV0 432 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 Q6ZSR3 168 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 GPR141Q7Z602 305 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 RDH10Q8IZV5 341 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 PLPP7Q8NBV4 271 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 LY6G5BQ8NDX9 201 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 NPRL2Q8WTW4 380 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 C10orf35Q96D05 121 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 TMED9Q9BVK6 235 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 SNTG1Q9NSN8 517 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 V9GYS6 101 aa11.25□□□□□ -0.61
DDX39A-201ENST00000242776 NDUFB3O43676 98 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 TFAP2AP05549 437 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 CD36P16671 472 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 ZNF20P17024 532 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 ALDH3B2P48448 385 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 RPS25P62851 125 aaKnown RBP11.24□□□□□ -0.61
DDX39A-201ENST00000242776 SSX1Q16384 188 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 MICBQ29980 383 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 Q499Y3 187 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 DEFB121Q5J5C9 76 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 OR4S1Q8NGB4 309 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 OR56B2PQ8NGI1 322 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 OR14K1Q8NGZ2 314 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 OR8S1Q8NH09 359 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 CFHR4Q92496 578 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 SLC22A4Q9H015 551 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 ENPP5Q9UJA9 477 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 STUB1Q9UNE7 303 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 PIGLQ9Y2B2 252 aa11.24□□□□□ -0.61
DDX39A-201ENST00000242776 NOP16Q9Y3C1 178 aaKnown RBP11.24□□□□□ -0.61
DDX39A-201ENST00000242776 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.23□□□□□ -0.61
DDX39A-201ENST00000242776 TRBV5-5A0A0J9YX44 114 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 ANKRD30BLA7E2S9 258 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 H3BSH0 61 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 FBXO24O75426 580 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 GATBO75879 557 aaKnown RBP11.23□□□□□ -0.61
DDX39A-201ENST00000242776 IGLL1P15814 213 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 GALP22466 123 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 KIR2DS4P43632 304 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 TEX36Q5VZQ5 186 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 WDR86Q86TI4 376 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 SPERTQ8NA61 448 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 OR51A4Q8NGJ6 313 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 OR13F1Q8NGS4 319 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 OR10AC1Q8NH08 325 aa11.23□□□□□ -0.61
DDX39A-201ENST00000242776 RGP1Q92546 391 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms