RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 RHOFQ9HBH0 211 aa19.93■□□□□ 0.78
MSX2-201ENST00000239243 SHPKQ9UHJ6 478 aa19.93■□□□□ 0.78
MSX2-201ENST00000239243 SFT2D2O95562 160 aa19.92■□□□□ 0.78
MSX2-201ENST00000239243 OR5H8P0DN80 308 aa19.92■□□□□ 0.78
MSX2-201ENST00000239243 CA6P23280 308 aa19.92■□□□□ 0.78
MSX2-201ENST00000239243 UCP2P55851 309 aa19.92■□□□□ 0.78
MSX2-201ENST00000239243 BEND4Q6ZU67 534 aa19.92■□□□□ 0.78
MSX2-201ENST00000239243 TMEM230Q96A57 120 aa19.92■□□□□ 0.78
MSX2-201ENST00000239243 OR2J1Q9GZK6 312 aa19.92■□□□□ 0.78
MSX2-201ENST00000239243 COMMD9Q9P000 198 aa19.92■□□□□ 0.78
MSX2-201ENST00000239243 MSTNO14793 375 aa19.92■□□□□ 0.78
MSX2-201ENST00000239243 LILRA1O75019 489 aa19.92■□□□□ 0.78
MSX2-201ENST00000239243 TUBG1P23258 451 aa19.92■□□□□ 0.78
MSX2-201ENST00000239243 OPRM1P35372 400 aa19.92■□□□□ 0.78
MSX2-201ENST00000239243 WDR31Q8NA23 367 aa19.92■□□□□ 0.78
MSX2-201ENST00000239243 STARD4Q96DR4 205 aa19.92■□□□□ 0.78
MSX2-201ENST00000239243 TUBG2Q9NRH3 451 aa19.92■□□□□ 0.78
MSX2-201ENST00000239243 DECR2Q9NUI1 292 aa19.92■□□□□ 0.78
MSX2-201ENST00000239243 FXYD6-FXYD2A0A087WZ82 144 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 DBX1A6NMT0 343 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 CGAP01215 116 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 PGAM2P15259 253 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 CXCL2P19875 107 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 HTR2BP41595 481 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 SORDQ00796 357 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 FOXC1Q12948 553 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 OPCMLQ14982 345 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 KRTCAP3Q53RY4 240 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 COQ8AQ8NI60 647 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 FXYD6Q9H0Q3 95 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 SPACA1Q9HBV2 294 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 RCC2Q9P258 522 aaKnown RBP19.91■□□□□ 0.78
MSX2-201ENST00000239243 ARPC5O15511 151 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 IFNA7P01567 189 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 BAMBIQ13145 260 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 DAZAP2Q15038 168 aaPredicted RBP19.91■□□□□ 0.78
MSX2-201ENST00000239243 TSC22D1Q15714 1073 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 BRICD5Q6PL45 260 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 DHRS11Q6UWP2 260 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 KCTD9Q7L273 389 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 ZNF610Q8N9Z0 462 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 ZNF680Q8NEM1 530 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 OR1J1Q8NGS3 322 aa19.91■□□□□ 0.78
MSX2-201ENST00000239243 SRSF7Q16629 238 aaKnown RBP eCLIP19.9■□□□□ 0.78
MSX2-201ENST00000239243 CLEC18BQ6UXF7 455 aa19.9■□□□□ 0.78
MSX2-201ENST00000239243 CXorf67Q86X51 503 aaPredicted RBP19.9■□□□□ 0.78
MSX2-201ENST00000239243 SLC25A40Q8TBP6 338 aa19.9■□□□□ 0.78
MSX2-201ENST00000239243 EXTL1Q92935 676 aa19.9■□□□□ 0.78
MSX2-201ENST00000239243 DPCDQ9BVM2 203 aaPredicted RBP19.9■□□□□ 0.78
MSX2-201ENST00000239243 OR51I2Q9H344 312 aa19.9■□□□□ 0.78
MSX2-201ENST00000239243 ZNF71Q9NQZ8 489 aaPredicted RBP19.9■□□□□ 0.78
MSX2-201ENST00000239243 SSUH2Q9Y2M2 353 aa19.9■□□□□ 0.78
MSX2-201ENST00000239243 IQCF6A8MYZ5 107 aa19.9■□□□□ 0.78
MSX2-201ENST00000239243 J3QT63 122 aa19.9■□□□□ 0.78
MSX2-201ENST00000239243 SYNGR1O43759 233 aa19.9■□□□□ 0.78
MSX2-201ENST00000239243 NOS1APO75052 506 aaPredicted RBP19.9■□□□□ 0.78
MSX2-201ENST00000239243 PDCD1Q15116 288 aa19.9■□□□□ 0.78
MSX2-201ENST00000239243 ZNF660Q6AZW8 331 aaPredicted RBP19.9■□□□□ 0.78
MSX2-201ENST00000239243 SLC22A25Q6T423 547 aa19.9■□□□□ 0.78
MSX2-201ENST00000239243 BATF2Q8N1L9 274 aa19.9■□□□□ 0.78
MSX2-201ENST00000239243 DYRK2Q92630 601 aa19.9■□□□□ 0.78
MSX2-201ENST00000239243 CCDC120Q96HB5 630 aa19.9■□□□□ 0.78
MSX2-201ENST00000239243 CTSDP07339 412 aaPredicted RBP19.89■□□□□ 0.77
MSX2-201ENST00000239243 IL13RA2Q14627 380 aa19.89■□□□□ 0.77
MSX2-201ENST00000239243 PLEKHN1Q494U1 663 aaPredicted RBP19.89■□□□□ 0.77
MSX2-201ENST00000239243 C1orf185Q5T7R7 199 aa19.89■□□□□ 0.77
MSX2-201ENST00000239243 SEM1Q6ZVN7 128 aa19.89■□□□□ 0.77
MSX2-201ENST00000239243 AMDHD2Q9Y303 409 aa19.89■□□□□ 0.77
MSX2-201ENST00000239243 CCSO14618 274 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 RPA2P15927 270 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 PRKACAP17612 351 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 PI3P19957 117 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 GLRA1P23415 457 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 CALCRP30988 508 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 S100A11P31949 105 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 Q6ZS49 121 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 OPN3Q9H1Y3 402 aaPredicted RBP19.88■□□□□ 0.77
MSX2-201ENST00000239243 CHMP1AQ9HD42 196 aaPredicted RBP19.88■□□□□ 0.77
MSX2-201ENST00000239243 LRP5LA4QPB2 252 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 F8VVB4 439 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 F8VWA3 439 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 CYCSP99999 105 aaKnown RBP19.88■□□□□ 0.77
MSX2-201ENST00000239243 IKZF1Q13422 519 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 FAM180AQ6UWF9 173 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 GSG1LQ6UXU4 331 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 BHLHA15Q7RTS1 189 aaPredicted RBP19.88■□□□□ 0.77
MSX2-201ENST00000239243 C1orf174Q8IYL3 243 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 FAM169BQ8N8A8 192 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 RAB18Q9NP72 206 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 POLDIP2Q9Y2S7 368 aa19.88■□□□□ 0.77
MSX2-201ENST00000239243 FAM221AA4D161 298 aa19.87■□□□□ 0.77
MSX2-201ENST00000239243 FAM25EA8MYX2 175 aa19.87■□□□□ 0.77
MSX2-201ENST00000239243 K7EM74 188 aa19.87■□□□□ 0.77
MSX2-201ENST00000239243 MPC2O95563 127 aa19.87■□□□□ 0.77
MSX2-201ENST00000239243 GLP1RP43220 463 aa19.87■□□□□ 0.77
MSX2-201ENST00000239243 SUPT4H1P63272 117 aaKnown RBP19.87■□□□□ 0.77
MSX2-201ENST00000239243 TMEM65Q6PI78 240 aa19.87■□□□□ 0.77
MSX2-201ENST00000239243 Q8IYB0 196 aa19.87■□□□□ 0.77
MSX2-201ENST00000239243 ADAT1Q9BUB4 502 aaKnown RBP19.87■□□□□ 0.77
MSX2-201ENST00000239243 LOC400499M0QZD8 3231 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms