RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TRAPPC6BQ86SZ2 158 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 CELF2-AS1Q8N7Q2 184 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 DTX3Q8N9I9 347 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 OR8G5Q8NG78 346 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 OR5D18Q8NGL1 313 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 OR4C16Q8NGL9 310 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 OR13G1Q8NGZ3 307 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 SLC25A40Q8TBP6 338 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 RNF170Q96K19 258 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 SCGB3A2Q96PL1 93 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 OR2J1Q9GZK6 312 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 RIMS4Q9H426 269 aaPredicted RBP11.26□□□□□ -0.61
SLIRP-201ENST00000238688 PLEKHJ1Q9NW61 149 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 GPR160Q9UJ42 338 aa11.26□□□□□ -0.61
SLIRP-201ENST00000238688 PURGQ9UJV8 347 aaKnown RBP11.26□□□□□ -0.61
SLIRP-201ENST00000238688 A0A0A6YYD4 124 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 EEF1E1-BLOC1S5C9J1V9 151 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 PDCD6O75340 191 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 HNRNPCP07910 306 aaKnown RBP eCLIP11.25□□□□□ -0.61
SLIRP-201ENST00000238688 CELA3BP08861 270 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 ZNF250P15622 560 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 FUT3P21217 361 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 HAAOP46952 286 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 GPM6AP51674 278 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 TMEM50BP56557 158 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 SELENOVP59797 346 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 DAZAP2Q15038 168 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-201ENST00000238688 OR2T2Q6IF00 324 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 RGS7BPQ6MZT1 257 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-201ENST00000238688 FIP1L1Q6UN15 594 aaKnown RBP11.25□□□□□ -0.61
SLIRP-201ENST00000238688 TMEM108Q6UXF1 575 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 ZNF782Q6ZMW2 699 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-201ENST00000238688 SLC25A26Q70HW3 274 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 TMEM17Q86X19 198 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 NUP37Q8NFH4 326 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 LINC01560Q8TB33 94 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 FAM222BQ8WU58 562 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 CCDC107Q8WV48 283 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 ASB13Q8WXK3 278 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 ARHGAP5-AS1Q96IT6 56 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 NICN1Q9BSH3 213 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 PECRQ9BY49 303 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 C20orf85Q9H1P6 137 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 MMP28Q9H239 520 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 OR51I2Q9H344 312 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 BANF2Q9H503 90 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 GPN1Q9HCN4 374 aaPredicted RBP11.25□□□□□ -0.61
SLIRP-201ENST00000238688 TMEM100Q9NV29 134 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 MCUBQ9NWR8 336 aa11.25□□□□□ -0.61
SLIRP-201ENST00000238688 ARID1AO14497 2285 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 A6NNC1 897 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 SNRPGP15A8MWD9 76 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 VSTM5A8MXK1 200 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 SOCS1O15524 211 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 NOS1APO75052 506 aaPredicted RBP11.24□□□□□ -0.61
SLIRP-201ENST00000238688 IGHV3-13P01766 116 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 MT-ND4P03905 459 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 GNB3P16520 340 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 CHATP28329 748 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 UBE2MP61081 183 aaKnown RBP11.24□□□□□ -0.61
SLIRP-201ENST00000238688 PSG7Q13046 419 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 ARFRP1Q13795 201 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 PLAC9Q5JTB6 97 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 CD276Q5ZPR3 534 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 FAHD2BQ6P2I3 314 aaPredicted RBP11.24□□□□□ -0.61
SLIRP-201ENST00000238688 Q6ZS49 121 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 HOGA1Q86XE5 327 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 ZDHHC22Q8N966 263 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 FAHD2AQ96GK7 314 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 RADILQ96JH8 1075 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 ADAT1Q9BUB4 502 aaKnown RBP11.24□□□□□ -0.61
SLIRP-201ENST00000238688 TLNRD1Q9H1K6 362 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 CXXC4Q9H2H0 198 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 POFUT1Q9H488 388 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 SEBOXQ9HB31 216 aaPredicted RBP11.24□□□□□ -0.61
SLIRP-201ENST00000238688 RCC2Q9P258 522 aaKnown RBP11.24□□□□□ -0.61
SLIRP-201ENST00000238688 ST3GAL6Q9Y274 331 aa11.24□□□□□ -0.61
SLIRP-201ENST00000238688 A0A1W2PPR1 153 aa11.23□□□□□ -0.61
SLIRP-201ENST00000238688 CEACAM18A8MTB9 384 aa11.23□□□□□ -0.61
SLIRP-201ENST00000238688 H7C1Q1 480 aa11.23□□□□□ -0.61
SLIRP-201ENST00000238688 SPRY1O43609 319 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-201ENST00000238688 PTBP3O95758 552 aaKnown RBP11.23□□□□□ -0.61
SLIRP-201ENST00000238688 CD3DP04234 171 aa11.23□□□□□ -0.61
SLIRP-201ENST00000238688 IFNA6P05013 189 aa11.23□□□□□ -0.61
SLIRP-201ENST00000238688 NKX6-1P78426 367 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-201ENST00000238688 SORDQ00796 357 aa11.23□□□□□ -0.61
SLIRP-201ENST00000238688 SURF2Q15527 256 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-201ENST00000238688 OR8G1Q15617 311 aa11.23□□□□□ -0.61
SLIRP-201ENST00000238688 GRK1Q15835 563 aa11.23□□□□□ -0.61
SLIRP-201ENST00000238688 RNASE12Q5GAN4 147 aaKnown RBP11.23□□□□□ -0.61
SLIRP-201ENST00000238688 SPIN3Q5JUX0 258 aa11.23□□□□□ -0.61
SLIRP-201ENST00000238688 MYPOPQ86VE0 399 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-201ENST00000238688 CALHM1Q8IU99 346 aa11.23□□□□□ -0.61
SLIRP-201ENST00000238688 FBXL14Q8N1E6 418 aa11.23□□□□□ -0.61
SLIRP-201ENST00000238688 GCDHQ92947 438 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-201ENST00000238688 SNAPC3Q92966 411 aa11.23□□□□□ -0.61
SLIRP-201ENST00000238688 EMG1Q92979 244 aaKnown RBP11.23□□□□□ -0.61
SLIRP-201ENST00000238688 NKX3-1Q99801 234 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-201ENST00000238688 DHRS9Q9BPW9 319 aa11.23□□□□□ -0.61
SLIRP-201ENST00000238688 CLEC4MQ9H2X3 399 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms