RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 PLCE1Q9P212 2302 aa12.92□□□□□ -0.34
HDHD3-201ENST00000238379 A0A0A6YYJ9 748 aa12.91□□□□□ -0.34
HDHD3-201ENST00000238379 HMX3A6NHT5 357 aa12.91□□□□□ -0.34
HDHD3-201ENST00000238379 C3orf80F5H4A9 247 aa12.91□□□□□ -0.34
HDHD3-201ENST00000238379 ARPC1BO15143 372 aaKnown RBP12.91□□□□□ -0.34
HDHD3-201ENST00000238379 HNRNPCP07910 306 aaKnown RBP eCLIP12.91□□□□□ -0.34
HDHD3-201ENST00000238379 ACAA1P09110 424 aaPredicted RBP12.91□□□□□ -0.34
HDHD3-201ENST00000238379 PGA5P0DJD9 388 aa12.91□□□□□ -0.34
HDHD3-201ENST00000238379 PMELP40967 661 aa12.91□□□□□ -0.34
HDHD3-201ENST00000238379 BSPH1Q075Z2 132 aa12.91□□□□□ -0.34
HDHD3-201ENST00000238379 NKPD1Q17RQ9 610 aa12.91□□□□□ -0.34
HDHD3-201ENST00000238379 MICBQ29980 383 aa12.91□□□□□ -0.34
HDHD3-201ENST00000238379 AKAP14Q86UN6 197 aa12.91□□□□□ -0.34
HDHD3-201ENST00000238379 BEST4Q8NFU0 473 aa12.91□□□□□ -0.34
HDHD3-201ENST00000238379 HPS1Q92902 700 aa12.91□□□□□ -0.34
HDHD3-201ENST00000238379 RNASE6Q93091 150 aaKnown RBP12.91□□□□□ -0.34
HDHD3-201ENST00000238379 SYT3Q9BQG1 590 aa12.91□□□□□ -0.34
HDHD3-201ENST00000238379 GINS4Q9BRT9 223 aa12.91□□□□□ -0.34
HDHD3-201ENST00000238379 SLC2A8Q9NY64 477 aa12.91□□□□□ -0.34
HDHD3-201ENST00000238379 RCC2Q9P258 522 aaKnown RBP12.91□□□□□ -0.34
HDHD3-201ENST00000238379 FAM90A27PA6NNH2 459 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 PYCARD-AS1I3L0S3 204 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 ABCD4O14678 606 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 TRAPPC2P0DI81 140 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 TRAPPC2BP0DI82 140 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 DUSP1P28562 367 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 MECP2P51608 486 aaKnown RBP12.9□□□□□ -0.34
HDHD3-201ENST00000238379 CDSNQ15517 529 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 ATAD3CQ5T2N8 411 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 Q8IYB0 196 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 GTF3AQ92664 365 aaKnown RBP12.9□□□□□ -0.34
HDHD3-201ENST00000238379 CMSS1Q9BQ75 279 aaKnown RBP12.9□□□□□ -0.34
HDHD3-201ENST00000238379 MRPL37Q9BZE1 423 aaKnown RBP12.9□□□□□ -0.34
HDHD3-201ENST00000238379 UBE2QL1A1L167 161 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 NKX2-6A6NCS4 301 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 ZSCAN5BA6NJL1 495 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 DISC1C4P0D8 188 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 BOLA2-SMG1P6H3BVE0 249 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 TPD52L2O43399 206 aaKnown RBP12.9□□□□□ -0.34
HDHD3-201ENST00000238379 NOS1APO75052 506 aaPredicted RBP12.9□□□□□ -0.34
HDHD3-201ENST00000238379 PMP2P02689 132 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 CSN2P05814 226 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 AMY2BP19961 511 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 DTYMKP23919 212 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 IL13RA2Q14627 380 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 MPPED2Q15777 294 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 VAX1Q5SQQ9 334 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 IDO2Q6ZQW0 420 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 LINC00596Q86U02 117 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 GIMAP1Q8WWP7 306 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 MAFIPQ8WZ33 124 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 DYRK2Q92630 601 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 SLC25A21Q9BQT8 299 aaPredicted RBP12.9□□□□□ -0.34
HDHD3-201ENST00000238379 NGBQ9NPG2 151 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 CA10Q9NS85 328 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 SCP2D1Q9UJQ7 156 aa12.9□□□□□ -0.34
HDHD3-201ENST00000238379 IGKV1D-8A0A087WSZ0 117 aa12.89□□□□□ -0.35
HDHD3-201ENST00000238379 IKZF1Q13422 519 aa12.89□□□□□ -0.35
HDHD3-201ENST00000238379 ACTBL2Q562R1 376 aa12.89□□□□□ -0.35
HDHD3-201ENST00000238379 PRAMEF6Q5VXH4 476 aa12.89□□□□□ -0.35
HDHD3-201ENST00000238379 SLC22A25Q6T423 547 aa12.89□□□□□ -0.35
HDHD3-201ENST00000238379 ZNF826PQ6ZT77 177 aa12.89□□□□□ -0.35
HDHD3-201ENST00000238379 POC1AQ8NBT0 407 aa12.89□□□□□ -0.35
HDHD3-201ENST00000238379 OR2Z1Q8NG97 314 aa12.89□□□□□ -0.35
HDHD3-201ENST00000238379 OR13C8Q8NGS7 320 aa12.89□□□□□ -0.35
HDHD3-201ENST00000238379 MRPL24Q96A35 216 aaKnown RBP12.89□□□□□ -0.35
HDHD3-201ENST00000238379 PRRT1Q99946 306 aa12.89□□□□□ -0.35
HDHD3-201ENST00000238379 BEX2Q9BXY8 128 aa12.89□□□□□ -0.35
HDHD3-201ENST00000238379 ZNF442Q9H7R0 627 aa12.89□□□□□ -0.35
HDHD3-201ENST00000238379 BEX1Q9HBH7 125 aa12.89□□□□□ -0.35
HDHD3-201ENST00000238379 ZNF701Q9NV72 531 aaPredicted RBP12.89□□□□□ -0.35
HDHD3-201ENST00000238379 EDARQ9UNE0 448 aa12.89□□□□□ -0.35
HDHD3-201ENST00000238379 USP24Q9UPU5 2620 aa12.89□□□□□ -0.35
HDHD3-201ENST00000238379 ADGRG4Q8IZF6 3080 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 PLSCR5A0PG75 271 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 PRAF2O60831 178 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 PTBP3O95758 552 aaKnown RBP12.88□□□□□ -0.35
HDHD3-201ENST00000238379 FCGR3AP08637 254 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 ANXA7P20073 488 aaKnown RBP12.88□□□□□ -0.35
HDHD3-201ENST00000238379 GRNP28799 593 aaKnown RBP12.88□□□□□ -0.35
HDHD3-201ENST00000238379 MZT1Q08AG7 82 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 ZMYND11Q15326 602 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 C11orf91Q3C1V1 193 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 SCGB2B2Q4G0G5 96 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 WDR82Q6UXN9 313 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 OR6F1Q8NGZ6 308 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 MRGPRFQ96AM1 343 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 CHST6Q9GZX3 395 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 IFT22Q9H7X7 185 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 HES4Q9HCC6 221 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 TAAR3PQ9P1P4 343 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 ERRFI1Q9UJM3 462 aaPredicted RBP12.88□□□□□ -0.35
HDHD3-201ENST00000238379 IGSF10Q6WRI0 2623 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 A0A1B0GUH1 482 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 FAM221AA4D161 298 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 H3BUI4 141 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 CCNKO75909 580 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 IFNA6P05013 189 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 CD200P41217 278 aa12.88□□□□□ -0.35
HDHD3-201ENST00000238379 TAS2R46P59540 309 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms