RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 MS4A10Q96PG2 267 aa11.85□□□□□ -0.51
NEK4-201ENST00000233027 WDR13Q9H1Z4 485 aa11.85□□□□□ -0.51
NEK4-201ENST00000233027 YTHDF2Q9Y5A9 579 aaKnown RBP11.85□□□□□ -0.51
NEK4-201ENST00000233027 COL18A1P39060 1754 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 TOX3O15405 576 aaPredicted RBP11.84□□□□□ -0.51
NEK4-201ENST00000233027 MMP7P09237 267 aaPredicted RBP11.84□□□□□ -0.51
NEK4-201ENST00000233027 MEOX2P50222 304 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 VMA21Q3ZAQ7 101 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 ZAR1Q86SH2 424 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 PIK3IP1Q96FE7 263 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 ZNF426Q9BUY5 554 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 BCL3P20749 454 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 ZNF770Q6IQ21 691 aaPredicted RBP11.84□□□□□ -0.51
NEK4-201ENST00000233027 NHLRC2Q8NBF2 726 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 BCL2L2Q92843 193 aaPredicted RBP11.84□□□□□ -0.51
NEK4-201ENST00000233027 POM121Q96HA1 1249 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 P4HTMQ9NXG6 502 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 PNPP00491 289 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 OR3A1P47881 315 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 FOCADQ5VW36 1801 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 ADAMTSL1Q8N6G6 1762 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 OR5H1A6NKK0 313 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 HLA-DRB3P79483 266 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 GTF2H5Q6ZYL4 71 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 LRP11Q86VZ4 500 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 DEFB123Q8N688 67 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 OR1A1Q9P1Q5 309 aa11.84□□□□□ -0.51
NEK4-201ENST00000233027 RPL29P47914 159 aaKnown RBP11.83□□□□□ -0.51
NEK4-201ENST00000233027 MICBQ29980 383 aa11.83□□□□□ -0.51
NEK4-201ENST00000233027 LILRA6Q6PI73 481 aa11.83□□□□□ -0.51
NEK4-201ENST00000233027 DEGS2Q6QHC5 323 aa11.83□□□□□ -0.51
NEK4-201ENST00000233027 LRRC29Q8WV35 223 aa11.83□□□□□ -0.51
NEK4-201ENST00000233027 DYRK2Q92630 601 aa11.83□□□□□ -0.51
NEK4-201ENST00000233027 SIPA1L3O60292 1781 aaPredicted RBP11.83□□□□□ -0.52
NEK4-201ENST00000233027 C3orf80F5H4A9 247 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 GEMIN2O14893 280 aaKnown RBP11.83□□□□□ -0.52
NEK4-201ENST00000233027 KLF9Q13886 244 aaPredicted RBP11.83□□□□□ -0.52
NEK4-201ENST00000233027 JMJD6Q6NYC1 403 aaPredicted RBP11.83□□□□□ -0.52
NEK4-201ENST00000233027 OR1L4Q8NGR5 311 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 CLEC5AQ9NY25 188 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 STRCQ7RTU9 1775 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 BMPR1BO00238 502 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 IGFBP7Q16270 282 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 ETV3LQ6ZN32 361 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 CA10Q9NS85 328 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 TRAV8-7A0A075B6U6 113 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 NAT1P18440 290 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 ZPBPQ9BS86 351 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 SLC2A8Q9NY64 477 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 LRRC3CA6NJW4 275 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 FBP1P09467 338 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 GABRA1P14867 456 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 PSG6Q00889 435 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 RPS4Y2Q8TD47 263 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 AAMDCQ9H7C9 122 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 TMEM9BQ9NQ34 198 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 TREM2Q9NZC2 230 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 CACFD1Q9UGQ2 172 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 STARD10Q9Y365 291 aa11.83□□□□□ -0.52
NEK4-201ENST00000233027 TMEM218A2RU14 115 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 SMIM17P0DL12 118 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 PNLIPP16233 465 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 MDH2P40926 338 aaKnown RBP11.82□□□□□ -0.52
NEK4-201ENST00000233027 AMTP48728 403 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 GAMTQ14353 236 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 IRF3Q14653 427 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 GFRALQ6UXV0 394 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 MOB1BQ7L9L4 216 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 HSD17B13Q7Z5P4 300 aaPredicted RBP11.82□□□□□ -0.52
NEK4-201ENST00000233027 ATG4DQ86TL0 474 aaPredicted RBP11.82□□□□□ -0.52
NEK4-201ENST00000233027 OR2I1PQ8NGU4 316 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 TMEM56Q96MV1 263 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 EFNB2P52799 333 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 RNPS1Q15287 305 aaKnown RBP11.82□□□□□ -0.52
NEK4-201ENST00000233027 FNDC7Q5VTL7 733 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 LYPD8Q6UX82 237 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 LIAT1Q6ZQX7 453 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 OR2M7Q8NG81 312 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 ZNF707Q96C28 371 aaPredicted RBP11.82□□□□□ -0.52
NEK4-201ENST00000233027 GPA33Q99795 319 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 ST8SIA5O15466 376 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 FGF2P09038 288 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 C3AR1Q16581 482 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 SPINK14Q6IE38 97 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 ETFRF1Q6IPR1 90 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 GPR27Q9NS67 375 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 TRBV5-3A0A0A0MS03 114 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 CTSDP07339 412 aaPredicted RBP11.82□□□□□ -0.52
NEK4-201ENST00000233027 S100A4P26447 101 aaKnown RBP11.82□□□□□ -0.52
NEK4-201ENST00000233027 NHLH1Q02575 133 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 NHLH2Q02577 135 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 TMEM183BQ1AE95 376 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 MPV17LQ2QL34 196 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 ACER2Q5QJU3 275 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 COL13A1Q5TAT6 717 aaPredicted RBP11.82□□□□□ -0.52
NEK4-201ENST00000233027 TMEM91Q6ZNR0 172 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 OR5D13Q8NGL4 314 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 MRPL24Q96A35 216 aaKnown RBP11.82□□□□□ -0.52
NEK4-201ENST00000233027 CYB5R1Q9UHQ9 305 aa11.82□□□□□ -0.52
NEK4-201ENST00000233027 NEU3Q9UQ49 428 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms